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Query: PF11695.8; Q9A5F4_CAUVC/31-168; Domain of unknown function (DUF3291 topsan), from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst LAQVNVGRLKAPIDHPMIKDFADNLDRINALAEASPGFVWRLTGEGNNATDLAIDSDPLFIPNLSVWSDIPSLGAFVYRSGHVEIMRRRREWFEHMDLYMALWWVPAGHTPTVEEALEKLAHLEAHGPTPAAFTFKVPLast
1 -15.9002go8_A mol:protein length:122 Hypothetical protein yqjZ  ali model follow..  13  14.....YAVIFSSVKSENDTGYGETAERMVSLAADQPGFLGVESVREADGRGI----------TVSYWDSMDAINHWRHHTEHQAAKEKGRS............................................... 89
2 -14.7004kia_A mol:protein length:167 Lmo2213 protein  ali model follow..  14  68.....VVFEYIHLRDEEIPIFLQMYQRASLHFSETPGLQ---------STKLTKAMNMNKFLIISFWDSEVFFHDWKKSPLSKEITNIMRKNNTQSGFSHE..................................... 154
3 -14.5001iuj_A mol:protein length:106 hypothetical protein TT1380  ali model follow..  15  3.....VTMNRIPVRPEYAEQFEEAFRQRARLVDRMPGFIRNLV--------LRPKNPGDPYVVMTLWESEEAFRAWTESPAFKEGHARSGTLPKE........................................... 84
4 -14.4002zdp_A mol:protein length:110 Heme-degrading monooxygenase isdI  ali model follow..  13  1.AHMFMAENRLQLQKGSAEETIERFYNR-QGIETIEGFQ------QMFVTKTLNTEDTDEVKILTIWESEDSFNNWLNSDVFKEAHKNVRL............................................... 83
5 -14.4004oz5_A mol:protein length:155 Bacillus subtilis HmoB  ali model follow..  12  67.....AVLNNIAVTQEGRPLFENKFKNRAGKVENEPGFE---------AIRVLRPLDSDTYVILTLWETERAFQDWQQSDSYKEAHKKIFS............................................... 143
6 -14.3003hx9_A mol:protein length:124 Protein Rv3592  ali model follow..  12  4.....VKINAIEVPAGAGPELEKRFAHRAHAVENSPGFLGFQL--------LRPVKGEERYFVVTHWESDEAFQAWANGPAIAAHAGHRAN............................................... 81
7 -14.3003tvz_A mol:protein length:172 Putative uncharacterized protein yhgC  ali model follow..  12  73.....AVLNNIAVTQEGRPLFENKFKNRAGKVENEPGFE---------AIRVLRPLDSDTYVILTLWETERAFQDWQQSDSYKEAHKKRGTSAGIDTTSI...................................... 158
8 -14.2005uq4_A mol:protein length:108 Monooxygenase  ali model follow..  13  3.AMPVVKINAIEVPAGAGPELEKRFAHRAHAVENSPGFLGFQL--------LRPVKGEERYFVVTHWESDEAFQAWANGPAIAAHAGHRANPVAT-GASLLEFEVVLDVGGTGKTA...................... 108
9 -14.1001tz0_A mol:protein length:114 hypothetical protein  ali model follow..  8  4MGYMFIETKTFTVKEGTSNIVVERFTG-EGIIEKFEGFI------DLSVLVKKVRRGDEEVVVMIRWESEEAWKNWETSEEHLAGHRAGRG............................................... 87
10 -13.9003kng_A mol:protein length:125 SnoaB  ali model follow..  16  18VNRFTV--------HGAPAEFESVFARTAAFFARQPGFVRHTL--------LRERDKDNSYVNIAVWTDHDAFRRALAQPGFLPHATALRALSTSEHGLFTARQTLPEGGDTTGSGHR.................... 119
11 -13.9001r6y_A mol:protein length:115 Protein ygiN  ali model follow..  11  5.....IAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMVDCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRIL..................................... 100
12 -13.8003kg0_A mol:protein length:128 SnoaB  ali model follow..  16  20VNRFTV--------HGAPAEFESVFARTAAFFARQPGFVRHTL--------LRERDKDNSYVNIAVWTDHDAFRRALAQPGFLPHATALRALSTSEHGLFTARQTLPEGGDTTGSGHR.................... 121
13 -13.8003fj2_A mol:protein length:186 Monooxygenase-like Protein  ali model follow..  15  81.....VVFEYIQLRDEEIPIFLQMYQHASLHFSETPGLQ---------STKLTKAMNTNQFLIVSFWDSEVFFQEWKKTPLHKEITSIMKK............................................... 157
14 -13.7004ae5_A mol:protein length:167 SIGNAL TRANSDUCTION PROTEIN TRAP  ali model follow..  9  68.....YCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFK---------SYRLLRPAKGTTYKIYFGFADRHAYEDFKQSDAFNDHFSKDAL............................................... 144
15 -13.6003fez_A mol:protein length:186 uncharacterized ferredoxin fold protein related to antibiotic biosynthesis monooxygenases  ali model follow..  15  81.....VVFEYIHLRDEEIPIFLQMYQRASLHFSETPGLQ---------STKLTKAMNMNKFLIISFWDSEVFFHDWKKTPLSKEITNIMKK............................................... 157
16 -13.6001xbw_A mol:protein length:109 hypothetical protein isdG  ali model follow..  14  2.TMKFMAENRLTLTKGTAKDIIERFYT-RHGIETLEGFD------GMFVTQTLEQEDFDEVKILTVWKSKQAFTDWLKSDVFKAAHKHVRS............................................... 84
17 -13.2001lq9_A mol:protein length:112 ACTVA-ORF6 MONOOXYGENASE  ali model follow..  12  11VAVVTFPVDGPATQHKLVELATGGVQEW---IREVPGFL---------SATYHASTDGTAVVNYAQWESEQAYRVNFGADPRSAELREALS............................................... 89
18 -13.1002zdo_A mol:protein length:109 Heme-degrading monooxygenase isdG  ali model follow..  14  2.TMKFMAEARLTLTKGTAKDIIERFYT-RHGIETLEGFD------GMFVTQTLEQEDFDEVKILTVWKSKQAFTDWLKSDVFKAAHKHVRS............................................... 84
19 -12.5005f9p_A mol:protein length:241 Anthrone oxidase-like protein  ali model follow..  15  123.....TVFTVFPVTPQGQDEALDALGPGQAFLAQVPGFR----AHVVLKGLRARGLEGAFVISYSQWDSKQAWEAYRDQAPQDQDEARKAA............................................... 204
20 -12.1002ril_A mol:protein length:99 Antibiotic biosynthesis monooxygenase  ali model follow..  6  7.....TLINPFKVPADKLEAAIEYWEAHRDFMAQQPGYLSTQLHQSID------EGATYQLINVAIWQSEADFYQAAQKMRQALGHVQVEGLCGNPALYRVI.................................... 97
21 -11.3003fgv_A mol:protein length:106 uncharacterized protein with ferredoxin-like fold  ali model follow..  13  18.......IVKSTPQRGKFNAFAELVGKLVSETRDFPGCL---------GAYLMLAPERNEQVVMHIWETPDALEAYLTWRADRGDFLEINEYLEV........................................... 96
22 -11.3003bn7_A mol:protein length:120 Ferredoxin-like protein  ali model follow..  10  15LFHQVFFWLKNPGDKADRDKLIAGL----KALKAIDVIQQLHVGVPAATEKRDVVDNSYDVSELMVFKSVEDQKRYRDHPLLQKFVADCSHLWSK........................................... 105
23 -10.8003gz7_A mol:protein length:115 Putative antibiotic biosynthesis monooxygenase  ali model follow..  11  14...MIQEIASILVQPGREADFEAGVAQARPLFMRARGCHGVALHRS--------IEAPQRYTLVVDWETVDNMVDFRQSADFQEWRKLVGECFAE........................................... 98
24 -10.5001q8b_A mol:protein length:105 Protein yjcS  ali model follow..  6  11ISMHYITACLKIISDKDLNEIMKEFKKLEEETNKEEGCITFHAYPL--------EPSERKIMLWEIWENEEAVKIH-FTKKHTIDVQKQ................................................. 90
25 -10.3004dpo_A mol:protein length:119 Conserved protein  ali model follow..  15  17MLAIRV-VAKNQVKPEKVQEFMNLCKSLIEETLKEEGCIDYGVYQE--------LENPEILTMLEEWKDEGSLDQHIRSDHFKEIFPLLSECLDK........................................... 102
26 -9.9403qmq_A mol:protein length:99 Autoinducer-2 (AI-2) modifying protein LsrG  ali model follow..  5  1MGSMHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRF--------DVLQDPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTG........................................... 87
27 -9.7004npo_A mol:protein length:125 Uncharacterized protein  ali model follow..  11  17.TTMVISHGTLSASAEHAAHLRQLLVHIAQATRQEDGCLLYLVSED--------LSQPGHFLITEHWDNLGAMHTHL-ALPGVTQAIDALKHLNVTDLKITAYEAGEAI............................. 115
28 -9.5401q4r_A mol:protein length:112 protein At3g17210  ali model follow..  11  11VKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAF------HWGKDVSIENLHQGYTHIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDK........................................... 99
29 -9.5105b08_A mol:protein length:104 Olivetolic acid cyclase  ali model follow..  10  6VKHLIVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDV------YWGKDVTQKNKEEGYTHIVEVTFESVETIQDYIIHPAHVGFGDVYRSFWEK........................................... 94
30 -9.5001wd6_A mol:protein length:123 Protein ydhR  ali model follow..  17  11.AMATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKV---------WTESEKNHEAGGIYLFTDEKSALAYLEK........................................................... 79
31 -9.4304hl9_A mol:protein length:118 Antibiotic biosynthesis monooxygenase  ali model follow..  9  14FQSMLKVIAQDFIKPEAIDIVLPLYRELVEKTRQEPLCLAYDLFVD--------QKDPGHFVFIEEWPDRAALDIHCATEHFTRLVPLINAHQRQ........................................... 100
32 -9.4105xzq_A mol:protein length:140 Hydroxynitrile lyase  ali model follow..  10  19VRHIVFNRYKSQLSQKQIDQIIADYGNLQNIAPE----MKEWKWGTDLGPAVEDRADGFTHAYESTFHSVADFLNFFYSPPALEFAKEFFPACEK........................................... 109
33 -9.2202omo_A mol:protein length:124 DUF176  ali model follow..  11  14QGHMYVTIVYASVKTDKTEAFKEATRMNHEQSIREPGNMRF--------DILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWMAE........................................... 100
34 -9.1903bb5_A mol:protein length:121 Stress responsive alpha-beta protein  ali model follow..  13  15LYHLVMLEPEGEGAMDRIMEAMAILDGLAPELPGLTEF------RHGPNRDFEQKSERYPYGFLCTFTDKAALDAYAVHPTHQRAGGMLVASCRN........................................... 103
35 -9.0702fb0_A mol:protein length:94 conserved hypothetical protein  ali model follow..  11  8.......NVFVRVNETNREKAIEAAKELTACSLKEEGCIAYDTFES--------STRRDVFMICETWQNAEVLAAHEKTAHFAQYVGIIQELAEM........................................... 87
36 -9.0602qyc_A mol:protein length:103 Ferredoxin-like protein  ali model follow..  16  5FLHVVMMEFDDGIDAGFFRTVDEYVARMKREC---DGLLLYHFGEN-----VAARSQGYTHATSSAFVDAAAHDAYQVCPAHVAMKAFMGPRIKR........................................... 91
37 -9.0402asy_A mol:protein length:123 Protein ydhR precursor  ali model follow..  15  16.HMATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKV---------WTESEKNHEAGGIYLFTDEKSALAYLEK........................................................... 84
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24