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Query: PF14117.6; D0J295_COMT2/9-67; Domain of unknown function (DUF4287 topsan), from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .
# Score Template Links and tools%idFirst GPASYFPSIEKAYGKPVTHWLKILDELRDKKHMEQVAHLKLEHGIGHGHANALVAYHRALast
1 -6.9002ww9_O mol:protein length:51 60S RIBOSOMAL PROTEIN L39  ali model follow..  11  16.........AKKQNRPLPQWIRLRTNNTIRYNAKRRNWRRTKMNI.............. 51
2 -6.9003jcs_l mol:protein length:51 ribosomal protein L39e  ali model follow..  16  16.........KMNQNKPVPYWIRLRTGNRIKWNEKRRHWRRTKLNY.............. 51
3 -6.9005xxb_k mol:protein length:51 Ribosomal protein eL39  ali model follow..  8  16.........KQKQNRPIPPWIRMRTGSKIRYNAKRRHWRRTKLGM.............. 51
4 -6.8803j79_e mol:protein length:51 60S ribosomal protein eL39  ali model follow..  13  16.........CRRQNRPVPHWYRLKKDTKIRYNTKRRHWRRTKLGL.............. 51
5 -6.8405xy3_l mol:protein length:51 60S ribosomal protein L39, putative  ali model follow..  8  16.........AMKVNRPMPQFIRQMTGVRHIRNPLTRHWRRRKMNI.............. 51
6 -6.8003j7o_l mol:protein length:51 Ribosomal protein eL39  ali model follow..  8  16.........KQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL.............. 51
7 -6.7705lzs_l mol:protein length:51 Uncharacterized protein  ali model follow..  8  16.........KQKQNRPIPQWIWMKTGNKIRYNSKRRHWRRTKLGL.............. 51
8 -6.7505t5h_q mol:protein length:50 Ribosomal protein L39  ali model follow..  13  15.........KLKQNRPVPYWIRLRTGNRIKWNEKRRHWRRTKLHY.............. 50
9 -6.2105zap_f mol:protein length:112 Small capsomere-interacting protein  ali model follow..  9  56GQAAALTDLGVTHANN------TFAPQPMFAGDAAAEWLRPSFGLKRTYSPFVVRDPKT 108
10 -5.8406cgr_G mol:protein length:112 Small capsomere-interacting protein  ali model follow..  14  56GQAAALTDLGLAHANN------TFTPQPMFAGDAPAAWLRPAFGLRRTYSPFVVR.... 104
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16.