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Query: PF15029.6; H0VXD9_CAVPO/9-242; Transmembrane protein 174, from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst DDFSLNVFSLTPYTPSTADIQVSDDDKAGATLLFSGIFLGLVGITFTVMGWIKYQSVSHFEWTQLLGPILLSVGVTFILIAVCKFKMLSCQLCKESEERVPDSEQTSGGQSFVFTGINQPITFHGATVVQYIPPPYGSQEPMAMNTAYLQSMVNPCGLLPSGGAAGAMPSPPQYCTICPQDNAAFVESEDYSSITDGRNSRSSLGADRLGEMQLEEEDYARFSSPPPYEEIYALLast
1 -7.7302wcy_A mol:protein length:155 COMPLEMENT COMPONENT C7  ali model follow..  19  115...................................................................SICVEVNGKEQTMSECEAGALRCRPCAAETQ........................................................................................................................................ 155
2 -7.7002k2c_A mol:protein length:137 RING finger and CHY zinc finger domain-containing protein 1  ali model follow..  15  1...............................MAATAREDGATGEERGQRGCEHYDRGCLLK------------------APCCD-KLYTCRLCHDNNEDHQLDRFKVKEVQCINCEKIQHAQ................................................................................................................ 72
3 -7.5802mmu_A mol:protein length:101 Cell division protein CrgA  ali model follow..  16  10.....NDFTVSAVSRTPMKVKVGPSSVWFVSLFIGLMLIGLIWLMVFQLAAIGSQAPTALNWMAQLGPWNYAIAFAFMITGL........................................................................................................................................................ 86
4 -7.5203x29_A mol:protein length:185 Claudin-19  ali model follow..  13  64............CKLYDSLLALDGHIQSARALMVVAVLLGFVAMVLSVVGMKATRVGDSNP--TAKSRVAISGGALFLLAGLCTLTAVSWYATLVTQESTPVNARYEFGPALFVGWASAGLAMLGGSFLAA....................................................................................................... 184
5 -7.4803wxx_B mol:protein length:219 AopB  ali model follow..  18  142........................GAAVGAMMIVGGA----VGVANMAIQQAAADGRISPETMKVLGPIMIAAEILVAIVSI........................................................................................................................................................ 195
6 -7.3304p79_A mol:protein length:198 Claudin-15  ali model follow..  7  22......LMLGLTLSNSYWRVSTVHGNVITTNTIFENLWYSCATDSLGVSNCWDFPSMLALSGYVQGCRALMITAILLGFLGFLGMVGLRATNVGNMDLSKKAKLLAIAGTLHILAGA--AISWYAVNITTDFFNP................................................................................................... 153
7 -7.3001sen_A mol:protein length:164 Thioredoxin-like protein p19  ali model follow..  17  24................................................IHWRTLEDGKKEAAAS---PLMVIIHKSW------------CGACKALKPKFAESTEISESHNFVMVNLEEPKDEDFSPDGGYIP..................................................................................................... 99
8 -7.3002k8v_A mol:protein length:157 Thioredoxin domain-containing protein 12  ali model follow..  17  1................................MMSDGHNGLGKGFGDHIHWRTLEDGKKEAAAS---PLMVIIHKSW------------CGACKALKPKFAESTEISESHNFVMVNLEEPKDEDFSPDGGYIP..................................................................................................... 92
9 -7.1306cfw_C mol:protein length:124 Monovalent cation/H+ antiporter subunit G  ali model follow..  13  4.........................YYLIIAFLGISVTFNMLG----SIALHRFPDV----YTRLHGATKCTFGTIFAALAVITHAIVKLQATGNPKYLQMAIHSFV---AMLALLLTNPVGAHAIAKAAH....................................................................................................... 99
10 -6.8004qhz_A mol:protein length:246 putative glycosyl hydrolase  ali model follow..  13  21EMSEFYEPVPPVVTPGTDLKGGGFTAPSDAIVLFDGKDLS---------AWESVKGGAA-EW-DVHDGVFTVNKKKGDIQTKQKFNDFQMHI---------EWQVPTNITGESQSRGNSGIFLQGMYEVQ-VLDCYNNPTYVNGQTGSIYKQSIPLDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQNHT--TILGTTEWIGFPQVKKHGAGPIILQSHGDPSEPISFRNIW.. 242
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.