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Query: PF15105.6; G1LS64_AILME/13-201; TMEM61 protein family, from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst APVLRYCMTVSGTVLLVAGTLCFAWWSEGDAGAQPGQPAPPTGRPVPEAPSPLLRSVSFFCCGAGGLLLLFGLLWSIKASTRGPPRWDPYRLSRDLYYQTVESSEKESYRLPELAAIPTYEEAMCCSLAEGPPTPAADPVEGGLKDSASGDALLGTQDPLPPPSYESVIGATHGVSGETAPGTAGSCPGLast
1 -8.4605cbf_A mol:protein length:129 Ion transport 2 domain protein  ali model follow..  17  27.......AVLSLAIIVTAATIFYTLWSVIDS-AVSVGLPMGNGPLSPTLTLSKIFTLVYAILVVGLFVTVGGSLASAIVQNN........................................................................................................... 106
2 -7.9403u8e_A mol:protein length:222 Papain-like Cysteine Protease  ali model follow..  17  11...........GAVTSVKDQ-CGMCWAFGATGAIEGIDAITTGRLISVSEQQIV-DCDTXXXXXXGGDADDAFRWVITNGGIASDANYPYTGVDG----TCDLNKPIAARIDGYTNVPNSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDDPATVDHTVLIVG................ 168
3 -7.3602q67_A mol:protein length:114 Potassium channel protein  ali model follow..  14  27.......LFVLTILTLISGTIFYSTLRPIDA-SVVTLTTVGAGNFSPQTDFGKIFTILYIFIGIGLVFGFIHKLAVNVQLPS........................................................................................................... 106
4 -7.3202hlq_A mol:protein length:100 Bone morphogenetic protein receptor type-2  ali model follow..  21  24..........NGTILCSKGSTCYGLWEKSKGDINLVKQGHYEECVVTTTPPSIQNGTYRFCCCSTDL.......................................................................................................................... 91
5 -7.2503e83_A mol:protein length:96 Potassium channel protein  ali model follow..  14  9.......LFVLTILTLISGTIFYSTLRPIDA-SVVTLTTVGDGNFSPQTDFGKIFTILYIFIGIGLVFGFIHKLAVNVQLPS........................................................................................................... 88
6 -7.1103vou_A mol:protein length:148 Ion transport 2 domain protein, Voltage-gated sodium channel  ali model follow..  14  30.......LFVLTFLTLTSGTIFYSTLRPLDA-SVVTLTTVGDGNFSPQTDFGKVFTILYIFIGIGLVFGFIHKLAVNVQLPS........................................................................................................... 109
7 -7.0503t1c_A mol:protein length:97 Potassium channel protein  ali model follow..  14  10.......LFVLTILTLISGTIFYSTLRPIDA-SVVTLTTVGYGNFSPQTDFGKIFTILYIFIGIGLVFGFIHKLAVNVQLPS........................................................................................................... 89
8 -7.0102fqh_A mol:protein length:109 Hypothetical protein TA0938  ali model follow..  17  1.........MSEVNIVVNGALCGATWGD----------------------ADFLGEDLFFCCDICAA-EFMNMMDEAFKHTARHN--GNYQLGRNVLLKNGEDRLRFYVKFGPGAVIKEFKIT.................................................................. 108
9 -6.8305tcx_A mol:protein length:246 CD81 antigen  ali model follow..  12  7TKSIKYLLFVFNFVFWLAGGVILG------LRHDPQTTNLLYLELGDKPAPNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFT-KQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGSNII..................................... 182
10 -6.7803tcu_A mol:protein length:97 Potassium channel protein  ali model follow..  14  10.......LFVLTILTLISGTIFYSTLRPIDA-SVVTLTTVGYGEFSPQTDFGKIFTILYIFIGIGLVFGFIHKLAVNVQLPS........................................................................................................... 89
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.