Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public

If you have questions about the server, please let us know.

Query: PF15432.6; F2I912_AERUA/17-140; Accessory Sec secretory system ASP3, from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120
# Score Template Links and tools%idFirst YAYGSQIVLENPDHIHFKNTLMPSGERITSWSSRSVFQTTKDSAKLPLLTRGESYQLIFQGKTVPEGSIFFKISFFDYYGGPIEEYYLRTPSDYFTVPDTYNYYEIALHHGGCLSLDFNQIILVLast
1 -66.7005vae_B mol:protein length:159 Accessory Sec system protein Asp3  ali model follow..  34  28YLYGSTIIFHSPDQVYFENKLIASGQTIHEWSSSWNYQGDRQVPSLPLLKRGRSYSLTRDMTSYPSESVFLKLIFFDRYNREVSNHVERSDKMTFTYPEEAYSYKVQLLSAGVESFEFHCLRIE 151
2 -10.0004mgs_A mol:protein length:150 Putative glycosyl hydrolase family 10  ali model follow..  70................................................IEIGKEYKLKMMVRGSAEGKLNFGVGPWSGRAEGSFSFNTEWKEYEFSFKAVADGGHVMTSGLFVGTIQIKYVKIT 146
3 -8.7604d0q_A mol:protein length:169 HYALURONATE LYASE  ali model follow..  14  27...GWSAWVDQKNSADASTRVIEAKDGAITISSHEK--LRAALHRMVPIEAKKKYKLRFKIKTDNIGIAKVRIIEESGKDKRLWNSATQTIEADYSPTLDVDKIKLELYETGTGTVSFKDIELV 154
4 -8.6204xun_A mol:protein length:181 Endo-1,4-beta-xylanase C  ali model follow..  12  20FEDGNIGNWRARGKLEVVSGIGHNSNRSLKTSSRSETYHGPLVEVLPYLQKGSTVHISFWAMYDEGPAGSLEKEFNRDTANLEYAMFASTTEADIIVPAESTGISGLRMETDTIPFYVDDVQIT 172
5 -8.5901gui_A mol:protein length:155 LAMINARINASE 16A  ali model follow..  21  69................................................LYRGKTYTISFKAKADTPRPINVKILQNHDPWTNYFAQTVQTFTFTYTHPDDAVQISFELGEGTATTIYFDDVTVS 153
6 -8.5501cx1_A mol:protein length:153 ENDOGLUCANASE C  ali model follow..  17  10................LPHTSFAES--LGPWSLYGTSEPVFADGRMCVVGEGESYVLSFTASATPDMPVRVLVG-AFEQGSAPLTGEPATREYAFTSNLTFGQVAFHLGKAGAYEFCISQVSLT 149
7 -8.5404mgq_A mol:protein length:168 Glycosyl hydrolase family 10  ali model follow..  13  43................................................LQSGKTYTLKLRVKTSAACDVTVWPQ-YWPTPSFKSTTEWTTVAQAFEAKSALKQLRFEL-GTLGGDIWMDDVQLL 121
8 -8.1704xup_A mol:protein length:334 Endo-1,4-beta-xylanase C  ali model follow..  16FEEGTTQGWTARGKVDVTAEQAYQGKQSLQTTGRTEAWNGPSLSLTDVVHKNEVVEISGYVKLVAGSALKFTVERRDGNGDTQYDQVNVKLQGQYSYEQGSSLLLYLESTDAKAAYLLDEFQIR 154
9 -8.0101h6y_A mol:protein length:170 ENDO-1,4-BETA-XYLANASE Y  ali model follow..  27...........PAEVLLSGRTAYKGSSLLVRNRTAAWNGAQRALNPRTFVPGNTYCFSVVASFIEGASFCMKLQYVDGSGTQRYDTIDMKYNPQYRIPSDATDMYVYVTADDTINFYIDEAIGA 154
10 -7.7601ulo_A mol:protein length:152 ENDOGLUCANASE C  ali model follow..  12  4................IGEGTFDDG--PEGWVGSAQYGVGVVLNGVA-IEEGTTYTLRYTATASTDVTVRALVGQNGAPYGTVLDTSPRQVTETFTASATYIAFQLGGFSADAWTLCLDDVALD 147

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.