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Query: PF15606.6; RHSA_ECOLI/1298-1372; Bacterial toxin 34, from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .
# Score Template Links and tools%idFirst PGLALDITMIASRGNVADTGITDRVNDIINDRFWSDGKKPDRCDVLQELIDCGDISAKDAKSTQKAWNCRHSRQSLast
1 -6.7304oo1_C mol:protein length:394 Exosome complex component RRP43  ali model follow..  17  213..LYAKIVVLSRTGPVFDLCWNSLMYALQS............................................. 240
2 -6.3102wp8_A mol:protein length:305 EXOSOME COMPLEX COMPONENT RRP45  ali model follow..  10  134..VRADVHFLDCDGGFIDASCIAVMAGLMH............................................. 161
3 -6.0303ma2_B mol:protein length:125 Metalloproteinase inhibitor 1  ali model follow..  12  57.....DIRFVYTPAMESVCGYFHRSHNLIAGKLQDGLLHITLCSFVAPWNSLSLAQRRGFTKTYTV-GCE..... 125
4 -5.8902csh_A mol:protein length:110 Zinc finger protein 297B  ali model follow..  16  51.........................HHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKSYEAAKAEQN 100
5 -5.8401d2b_A mol:protein length:126 TISSUE INHIBITOR OF METALLOPROTEINASES-1  ali model follow..  9  59.......RFVYTPAMESVCGYFHRSHNLIAGKLQDGLLHITTCSFVAPWNSLSLAQRRGFTKTYTV-GCEE.... 126
6 -5.8003wcz_A mol:protein length:308 Aldo-keto reductase 2E  ali model follow..  20  17PIVALGTGRGTAKESDSIDEVRQAVYWAIEDTAAVYQDEEQVGQGIAEAIANGLVTREELFVTTKLWNDKHARDQ 97
7 -5.7704oo1_E mol:protein length:269 Exosome complex component RRP42  ali model follow..  10  128..IFVDVLVISSHSHPVSLISFAIYSALNSTY........................................... 157
8 -5.7601zgd_A mol:protein length:312 chalcone reductase  ali model follow..  16  21PVVGMGSAPDFTCKKDTKDAIIEAIKQ---DTAAAYGSEQALGEALKEAIELGLVTRDDLFVTSKLWVTENHPHL 97
9 -5.5401v4g_A mol:protein length:518 Glutamate--cysteine ligase  ali model follow..  9  25.GLERETLRVNADGTLATTGHPEALGSALTHKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRY......... 89
10 -5.4304z42_B mol:protein length:164 Urease subunit beta  ali model follow..  18  107PGDETEVPLIPFGGKQTLYGFNNLVDGWTGEGVVPNSERPDKLEAIRRAAERGFKSSK................. 164
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.