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Query: PF15664.5; E2RC46_CANLF/29-168; Transmembrane protein 252 family, from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140
# Score Template Links and tools%idFirst SSGSIFNCRGNLILAYMLLPLGFVILLSGIFWSTYRQASKSKGVFTHVLRRHLSHGALPLATVDRPDFYPPAYEESLDAEKQPCPTEGEVSDIPPPLYTEPGLEFEDAADAHPEAPPSYEESVAGGVPAATPLQDAERQSLast
1 -9.8603bow_C mol:protein length:95 Calpastatin  ali model follow..  19  45...............................................................ERDDTIPPEYRHLLDNDGKDKPEKPLTKNTEKPGQDQDPIDALSEDLD---SCP....................... 95
2 -8.4002knc_B mol:protein length:79 Integrin beta-3  ali model follow..  16  21.................ILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEATSTFTNITYRGT................................................................ 79
3 -7.5003df0_C mol:protein length:86 Calpastatin  ali model follow..  13  42...............................................................IKEGTIPPEYRKLLEKNEAITGPLPDS---PKPMGIDHAIDALSSDFT............................. 86
4 -7.5005h1s_h mol:protein length:116 50S ribosomal protein 6, chloroplastic  ali model follow..  20  52.......................................QKKGTAHHMKTRPKKTARWDIKR--GPAVYPP-------------------LPPLPAEWTIVSSAVDEADSSSSTTSSSAEIAQS................ 115
5 -7.3503j7y_8 mol:protein length:206 mL40  ali model follow..  19  121...............................WSLYERKMERDTIRAMLEAQQEALEELQLES-------PKLHAEAIKRDPNLFPFEKEGPHYTPPIYQPPEGRYNDIT............................... 196
6 -7.3005zyf_A mol:protein length:92 CRISPR-associated endoribonuclease Cas2  ali model follow..  19  33.................LLSEGFIMHQFSIYSKLLLNNTANNAMIGRLREHNPNKGNITLLTVTEKQF........................................................................ 83
7 -7.2702vsm_B mol:protein length:140 EPHRIN-B2  ali model follow..  13  1........................IVLEPIYWNSSNSKFLPGQ-----------GLVLYPQIGDKLDIICPKVDSKTVGQYEYYK-----------VYMVDKDQADRCTIKKENT......................... 69
8 -7.2102wo3_B mol:protein length:157 EPHRIN-A2  ali model follow..  17  7..........................RYAVYWNR------SNPRFHAGAGDDGGGYTVEVSINDYLDIYCPHYGAPLPPAERM......................................................... 57
9 -7.1504v1a_d mol:protein length:206 MITORIBOSOMAL PROTEIN ML40, MRPL40  ali model follow..  21  121...............................WSLYK--QREHEMERSAIRSLLEAQEEALQELRLSS--PELHAEATKRDPSLFPFERQGPDYTPPIYQPPEGRYQDIT............................... 196
10 -7.1405nf8_A mol:protein length:174 Respiratory supercomplex factor 1, mitochondrial  ali model follow..  13  33.................LVPIGCLLTTGAVILAAQNVRLGNKWKAQYYFRWRVGLQAATLVALVAGSFI---YGTSGKELKAKEEQLKEKAKMREKLWIQELERREEETEARRKRAELARMKTLENEEEIKNLEKELSDL 152
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.