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Query: PF16311.5; H2L5R6_ORYLA/1-133; Transmembrane protein 100, from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130
# Score Template Links and tools%idFirst MPEEVNKDAMRTPSTSDKATNSERPAATATAVNIPLVNEVQLTAATGGAELSCYRCTIPFGVVVLIAGIVVTVVAYSFNSHGSTISYFGLVLLSAGLLLLASSAICWKVKLERKKERRRESQTVLVTNQRSIFLast
1 -7.4005nf8_A mol:protein length:174 Respiratory supercomplex factor 1, mitochondrial  ali model follow..  14  33........................................................LVPIGCLLTTGAVILAAQNVRLGNKWKAQYYFRWRVGLQAATLVALVAGSFIYGTSGKELKAKEEQLKEKAKMR... 106
2 -7.1901qle_C mol:protein length:273 CYTOCHROME C OXIDASE POLYPEPTIDE III  ali model follow..  12  11................................................LPPSIWPFFGAIGAFVMLTGA----VAWMKGITFFGLPVEGPWMFLIGLVGVLYVMFGWW-HTPVVRIGLQYGFILFIMSEVMFF 101
3 -7.1002i68_A mol:protein length:137 Protein emrE  ali model follow..  30  54.........................................................IPTGIAYAIVGIVLISLLGFFGQRLDLPAIIGMMLICAGVLII................................. 101
4 -7.0502n4x_A mol:protein length:208 Cytochrome C-type biogenesis protein (CcdA)  ali model follow..  26  12.........................................LMAFALGILSVFSPAVLPV-IFAGSRGRALDAFLISMLILGYTASLFFLFLLIFALILLS................................ 87
5 -6.8401s6n_A mol:protein length:115 envelope glycoprotein  ali model follow..  15  46.................KVPISSVASLNDLTPVGRLVTVNPFVSVATANAKVLIELEPPFGDSYIVVGRGEQQINHHWHKSGSSIG............................................... 114
6 -6.7102p5p_A mol:protein length:117 Genome polyprotein  ali model follow..  15  39.................KVPISSVASLNDLTPVGRLVTVNPFVSVATANAKVLIELEPPFGDSYIVVGRGEQQINHHWHKSGSSIG............................................... 107
7 -6.5504j05_A mol:protein length:530 Phosphate transporter  ali model follow..  11  104......................................................KFVYGKELILIIVATIFQMSAPSHWDGNRVLTWITICRVFLGIGIGGDYPMSATVVSDRANIHRRGTLLCFI....... 175
8 -6.4302m67_A mol:protein length:81 MerF  ali model follow..  22  8.........................................LRVSIIGTTLVALSSFTP--VLVILLGVVGLS---------ALTGYLDYVLLPALAIFIGLTI--YAIQRKRQA.................. 68
9 -6.3803uzv_A mol:protein length:114 envelope protein  ali model follow..  26  78..........................................................PFGDSYIIIGVEPGQLKLNWFKKGSSIGQL............................................. 107
10 -6.3201pjw_A mol:protein length:111 envelope protein  ali model follow..  16  45.................KIPIVSVASLNDMTPVGRLVTVNPFVATSSANSKVLVEMEPPFGDSYIVVGMGDKQINHHWHKAGST................................................. 111
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13.