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Query: PF17319.2; D1ARU2_SEBTE/23-116; Family of unknown function (DUF5362 topsan), from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90
# Score Template Links and tools%idFirst LKFIGLVQQIMGVLTIISGAIMCLTIIGAAAGVPYIIGALNIFKSGGAFGDTSRNESGESLREAIAGLAKGMKLMLIGFVIWIVLYILLMVVIMLast
1 -7.6001jvw_A mol:protein length:167 MACROPHAGE INFECTIVITY POTENTIATOR  ali model follow..  20  21.LFMEQKAAQPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERPNEVIKGWTEALQLMREG................ 104
2 -7.2803f6z_B mol:protein length:101 Putative uncharacterized protein  ali model follow..  13  33VQYLNKGDNSLAVVPVSDNSTLVFSNVISASGAKYAAGQYIWWTKGEEATLYGDWKGGEP.................................. 92
3 -6.7402ftr_A mol:protein length:108 BH0200  ali model follow..  11  31.THAPLTRKIPGLRDMKVTRIV-----SPMGESKFYLMCEMYYDDHESLQQAMRTDEGKASGKDAMKFAGKLLTLMIGEEM............. 106
4 -6.4105xb0_A mol:protein length:133 Peptidyl-prolyl cis-trans isomerase  ali model follow..  20  15.TFMAGEKAKPGVKELADG-ILMTELTPGTGPKPDANGRVEVRYVGGKIFDQSTQPQWFRLDSVISGWTSALQNMPTG................ 94
5 -6.2401ohh_H mol:protein length:84 ATPase inhibitor, mitochondrial  ali model follow..  22  1...........................GSESGDNVRSSAGAVRDAGGAFGKREQAEEERYFRARAKEQLAALKKHH.................. 49
6 -6.2201gmj_A mol:protein length:84 ATPASE INHIBITOR  ali model follow..  22  1...........................GSESGDNVRSSAGAVRDAGGAFGKREQAEEERYFRARAKEQLAALKKHK.................. 49
7 -6.2102cjr_A mol:protein length:128 NUCLEOCAPSID PROTEIN  ali model follow..  19  21.........................TATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHQIAQFAPSASAFFGMSRI............. 78
8 -6.1105nf8_A mol:protein length:174 Respiratory supercomplex factor 1, mitochondrial  ali model follow..  18  33.......................LVPIGCLLTTGAVILAAQNVRLG------NKWKAQYYFRWRVGLQAATLVALVAGSFIY............ 85
9 -6.0602ypa_A mol:protein length:91 T-CELL ACUTE LYMPHOCYTIC LEUKEMIA PROTEIN 1  ali model follow..  19  34....................................................NVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLL 75
10 -5.9603wny_A mol:protein length:63 Bovine Pancreatic Trypsin Inhibitor  ali model follow..  25  28.....................................GAAQAFVYGGVRAKRNNFASAADALAACAAAGGKKK..................... 63
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.