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Query: PF18719.1; A0A0Q3WY42_9BACI/40-166; ArlS sensor domain, from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst IRQVMLHEEATNISQELSEIINFYKNRPFSSMEDIQNNSDIIKQLLEKDQTLYVLNQKLQGFAISKTDNKKPKSLIEYEPVKEKTVDLTTIDGRKIYVGRAPIVSNGFSGYIGVVDPLTRYHQMMTSLast
1 -12.3004ywz_A mol:protein length:152 Sensor protein kinase WalK  ali model follow..  10  7LEKELLDNFKKNITQYAKQLEISIEKDEKGSVNAQKDIQNLLSEYANMQEIGEIRFIDKDQIIIATTKQSNRKALSLGQSNDHLILKDYGGGKDRVWVYNIPVKVKKVIGNIYIESKINDVYNQLNN 149
2 -12.2005is1_A mol:protein length:152 Histidine kinase  ali model follow..  10  7LEKELLDNFKKNITQYAKQLEISIEKDEKGSVNAQKDIQNLLSEYANRQEIGEIRFIDKDQIIIATTKQSNRKALSLGQSNDHLILKDYGGGKDRVWVYNIPVKVKKVIGNIYIESKINDVYNQLNN 149
3 -10.1003b47_A mol:protein length:134 Methyl-accepting chemotaxis protein  ali model follow..  10  3....IMDLQTRNTRGLSTLVVRDI--GELMMAGDMAVIERYVADVRGKGAVLDLRIYDAAGRPAGKKQDAPDGEVQAALTSGATAEKRHKVDGRHVLSFIVPLANARFNGAMLLTTSLEEGYAGAR. 133
4 -9.5304zr7_A mol:protein length:126 Sensor histidine kinase ResE  ali model follow..  14  3.....AEEAENDLTQLANKVAVILENH-----EDQALARSITWELADNLTSIAIIQDEKN-VEQIQHDKDLNKALKDHKKVSKRTGLSDTDTDNERLIVGVPYEKDGKKGMVFLSQSLLA....... 126
5 -8.4503b42_A mol:protein length:135 Methyl-accepting chemotaxis protein, putative  ali model follow..  15  1..RSSLDLQLKNARNLAGLIIHDIDG--YMMKGDSSEVDRFISAVKSKNFIMDLRVFDEQAKEVSPTPSQTPNAKIQQAIAAGRTLEFKTLDGKRTLSLVLPFPNAAYLGGLLVTTSIEEGYEGAR. 134
6 -7.9403cwf_A mol:protein length:122 Alkaline phosphatase synthesis sensor protein phoR  ali model follow..  9  3AETSDQRKAEEHIEKEAKYLASLLDAGNLNNQANEKIIKDAGGALDVS---ASVIDTDGK---VLYGSNGRSADSQKVQALVSGHEGILSTTDNKLYYGLSLRSEGEKTGYVLLSASEKSD...... 117
7 -7.2104jgo_A mol:protein length:217 Sporulation kinase D  ali model follow..  14  21....LLNLHRNKINYLIGETMARMTSIAIDRPVDIKKMQSILEKTFDSEPRLYFLNAKGDKTKVNLADRSFFIKAKETKKTVISDSYSSRITGQPIFTICVPVSKRNVTDYLVAAIQIDYLKNLINL 158
8 -7.0305gpo_A mol:protein length:132 Sensor protein CzcS  ali model follow..  13  3..HMASARERENLQLKLEQIRHSLEDDLDLRSDPAVQAHALQDQLVAHSGLLSILDSRSG................................................................... 61
9 -6.7201d9s_A mol:protein length:136 CYCLIN-DEPENDENT KINASE 4 INHIBITOR B  ali model follow..  9  19..........AAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCRLPVDLAEEQGHRDIARYL......... 130
10 -6.5802lpm_A mol:protein length:123 Two-component response regulator  ali model follow..  6  10..RVLVVEDESMIAMLIEDT---LCELGHEVAATASRMQEALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATGYGSKGLDTRYSNIPLLTKPFLDSELEAVLVQI............ 119
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.