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Query: PF00169.29; GRP1_CAEEL/262-380; PH domain, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .
# Score Template Links and tools%idFirst AEREGWLFKQSSNPLFSGALSWKKRWFVLSENCLYYFDQMTDKEPKGIITLANVGIRKVEAPSRPFMFEIFSLSDGQIKACKTEQDGRLVEGRHSIYKICAVNDEDMRSWINAISRMMALast
1 -76.700PF00169.29; GRP1_CAEEL/262-380; PH domain  ali  100  1AEREGWLFKQSSNPLFSGALSWKKRWFVLSENCLYYFDQMTDKEPKGIITLANVGIRKVEAPSRPFMFEIFSLSDGQIKACKTEQDGRLVEGRHSIYKICAVNDEDMRSWINAISRMMA 119
2 -47.300PF15413.6; A0A0D2UEA3_CAPO3/130-226; Pleckstrin homology domain  ali follow..  23  2...HGWLNKLGAKGL---VKTWKTRWMVFQPFSLHYYESPKDVYPLGTIDISNATFTIDNDANKH-----------------SDSGHFSINTEARRYILAARDKETMLGWLGSLQE... 96
3 -42.000PF15409.6; C5GMH2_AJEDR/217-304; Pleckstrin homology domain  ali follow..  21  1....GILQKRRRKR----HQGYARRFFSLTSSTLSYYHDRNSSALRGAIPLNLAVIAT-----------------------NQKTREISIDSGVEIWHLRASNDSDFLAWKRALEKA.. 88
4 -38.500PF15406.6; H6BUU9_EXODN/90-198; Pleckstrin homology domain  ali follow..  15  19ESLASFLRSEKPE-----GKHSTAAWARETGKGLLFFAKRVEDKPVGIINLADASNVIKDGYDQ-----------------------FSFKAGGHQHRFEASKPTERDGWVVAIEKA.. 109
5 -37.500PF14593.6; A0A0D2WRZ9_CAPO3/483-586; PH domain  ali follow..  15  13IIKTGIIHKRKG-------LFSKRRQLVLTDKPRCLYIDVDKMEIKGEIPWSTE-----------------------MRFEVKNKKTFFIHTPNRTYYL-EDLSADAYGWCEQFNALLK 100
6 -34.600PF00373.18; Q4T8R8_TETNG/86-414; FERM central domain  ali follow..  13  92PELNDYLKIFRPKKLTL--NKYKQFWFKFQDTSISYFKSKEEGEPIQQIHLKGCEVAPVNVAAQKFLIKLLVPAPE----------------GMNEVYLRCDDVRPHTHTHTHSLSI.. 193
7 -29.600PF15410.6; W5JQ26_ANODA/1159-1272; Pleckstrin homology domain  ali follow..  14  2..KKGYVYRKNRKKIPFGRRSWKMVYLTLSKLVLYLHKNERSVTVQNCIRIHHGLATCATDYTK------------------KQHVFRLQTAEQAEFLLQTGDSKELQSWVDNINYVCA 114
8 -27.300PF12814.7; Q6CF84_YARLI/3022-3141; Meiotic cell cortex C-terminal pleckstrin homology  ali follow..  12  13....EYLFKYTRRFGSVSSENRHQRYFWVHTLTLYWSVENPSADVKA------------GKVKSVPITSVVSEEDDNPLPPGLFHKSLLIGTPDRVIKVTCPTRQRHNIWYSSLRYLLT 119
9 -22.100PF17838.1; H2UDE2_TAKRU/444-559; PH domain  ali follow..  13  17......LLHDGNLLWKTPGSRHKDVQVLLMTDVLVFLQEKDQRDKPAVLSLQNLIVRDIANQERGM-------------------FLIIDSSPPVMYEFHATTKEKKNVWMRHIQHAVS 116
10 -21.100PF16453.5; E4XUI6_OIKDI/553-682; PH domain  ali follow..  10  13.VCYCRMYQVADVT-RPQRPGLHTREVFLFNDLLLVTKRRSQYTYRLDAPLTSLEVEYFGNEHYPHAVRIIK-------------------TGKVLITFSLPNQDDCKNFIQDISESIL 114
11 -20.800PF16652.5; C3ZLK0_BRAFL/964-1114; Pleckstrin homology domain  ali follow..  13  26..HSGTLFKVKSN---------KELQAFLFNDFLLLTTCSKSVSGA-PIFLNEVIVKLPTDKEDAD------------------EPVFFLNHVDKVYQFRTEKASERNQWMKIMESASQ 129
12 -17.300PF15405.6; G1XBW2_ARTOA/827-954; Pleckstrin homology domain  ali follow..  11  1LIFKGSLKRSPTDT------GTGDIQAFLFDHAILLVKIKVVNK-KRPIPLELLVINEMAEVLPERGIKRPPSSLLPKAGNQQKADANALGKRGYVLSLFAATVVGRRKWMEHIEAQ.. 127
13 -15.700PF16457.5; B7Q7M8_IXOSC/553-677; Pleckstrin homology domain  ali follow..  12  10..CEGLFTKYSAKGHRIKD---KFWYCRLSPSVFHYGDCEESAVPSLEDLPHKLPVVEIRSLATGRECPYMK-DTRKAKSTASLAFSLIPDSDQEPLNFVASNEKVFDYWTDGINALLG 125
14 -11.700PF15404.6; C5DN47_LACTC/1032-1239; Pleckstrin homology domain  ali follow..  10  1..QNGVLYQKARKH-----SIFRKFYVILTPGFLILYQYFKSARHFMTIPIEECYV-KSSEDESSKCFTLWFGTKRAISNYNSLKVVSRLGVSGRSMVFMARSRQERDQWAMKIHAEL. 208
15 -11.700PF17787.1; H0X1B8_OTOGA/12-141; PH domain  ali follow..  5......YLSQGERFIKWDDETTIASPVILRGYYLYWTYQSKEIELLDITSIRDTRFGKFAKIPKSQKLREVFNMDFPDNNFLLKTLTVVSGPDLTFHNFVSYKENVGKVWAEDVLALVK 124
16 -10.700PF15411.6; G9NQW5_HYPAI/397-517; Pleckstrin homology domain  ali follow..  16  1.ESFGKLLLHGVYGVITGKSEQEKDYEILFECILLCCKEISPNKSKGRIFMTNVTDVVSLSKPGSHSVQIWWKG----------------DPGVENFTIKFLTEEMMKKWANG...... 121

FFAS is supported by the NIH grant R01-GM087218-01
1 3 8 7 1 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24