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Query: PF00359.22; Q9KMS5_VIBCH/6-152; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .
# Score Template Links and tools%idFirst SLIENNSIQLQAKANNWREAIKIGTDMLIASGAITPAYHEAIIASVEQLGPYICIAPNLALPHARPENGVLRTAFALVTLQEPIYFEGEDEPVDVLITLAGSSSDEHMEGLMEVTQVLDDENSATGVDLDKLRRCRDKQQVYAVIDQLast
1 -81.800PF00359.22; Q9KMS5_VIBCH/6-152; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2  ali  100  1SLIENNSIQLQAKANNWREAIKIGTDMLIASGAITPAYHEAIIASVEQLGPYICIAPNLALPHARPENGVLRTAFALVTLQEPIYFEGEDEPVDVLITLAGSSSDEHMEGLMEVTQVLDDENSATGVDLDKLRRCRDKQQVYAVIDQ 147
2 -8.840PF09342.11; Q7QJ48_ANOGA/1774-1887; Domain of unknown function (DUF1986 topsan)  ali follow..  15  3................WNTNIYLDGVMICSGLIIDASWIGSCTRLVNLRHQYLAVVAGGAKSYLHIEGPYEQVETVMLHLATKLSFSRHVLPTFV.................................................... 96
3 -7.900PF02332.18; G7ZAS0_AZOL4/60-290; Methane/Phenol/Toluene Hydroxylase  ali follow..  10  20............KCTDWRAPDQEWERTHYQRQSTIVGMIQNVVENARRAGAPQRFDKAWVTVLQNHVGAFKHAEYGLGTALMRAQRYGYTQMVNNAILTNASYKLRFAQDLTLYLAEVGSD.......................... 131
4 -6.210PF00557.24; YOD1_SCHPO/228-435; Metallopeptidase family M24  ali follow..  17  1........DIMSRVNIATVAAIRSVQPCIKPGITEKELAEVINMLFVYGGPIVLFGERAAMPHGGPSNRRLKKS-EFVLMDVGTTLFGYHSDCTRTVLPHGQKMTERMEKLWNLVYDAQTAGIQMLSHLSNTSCAEVDLAARKVIKD 144
5 -5.930PF01641.18; I3ZC28_TERRK/26-145; SelR domain  ali follow..  13  1...............EWRQILSPERFAVLRQKGTERAFTGELYEN-HDDGIYHCGACDAPLSDTKFESGSGWPSFFTPVTPDAVEAIEDNAYGMRRIEVVCATCGSHLGHV.................................... 97
6 -5.760PF16858.5; E9GRW6_DAPPU/321-617; Condensin II complex subunit CAP-H2 or CNDH2, C-term  ali follow..  17  187....VTSTESTRRVQAWHDMIQPRLREAEMRRDFDHLYGSRIIEEFGAAAPIGSQCAFTKIVHDQPKNEVARYFLATLQLANAVEIQLQDALTLDGVELKLLSRERHHEHMD................................... 297
7 -5.680PF05118.15; A2SI92_METPP/69-223; Aspartyl/Asparaginyl beta-hydroxylase  ali follow..  18  37..............TGWKRFYLTWYGKELSSANALCPQTVALLKSIPSIKAFASLPPGATLRHRDPYAGSLRYHLGLTTPNDPIEVDGQRYHWKDGEVVMFDETFIH........................................ 135
8 -5.670PF04617.13; H2LV26_ORYLA/8-188; Hox9 activation region  ali follow..  22  1...........................MSTTGPITNYYVDSLIESDDVIAAARFSAPGSHPAGPRPTSLVPECG-SCSFAPKPPVFSSSWAPVH..................................................... 71
9 -5.450PF00975.20; FAS_HUMAN/2242-2501; Thioesterase domain  ali follow..  16  34.......................RAAPLDSIHSLAAYYIDC-IRQVQPEGPYRVAGYSYG---------------ACVAFEMCSQLQAQQSPAPTHNSLFLFDG........................................... 98
10 -5.300PF07565.13; H3DGF3_TETNG/144-400; Band 3 cytoplasmic domain  ali follow..  21  163...................................................................DFLNRPVVAFVRLSPAVLLSGLAEATRFLFILLGPTGRQYHEIGRSMATLMTDEVFH-----DVAYKAKDRNDLIAGIDE 242
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.