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Query: PF00390.19; Q9U1J2_DROME/102-283; Malic enzyme, N-terminal domain, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst HHRHRRLYYRFIKENIEKSLPIVYTPTVGDVVATYGLNFQQAISLFISIHDKGHIRDLMHNWVDEGVKAICVTDGGRVLGLGDMGANAMGISLGKMILYTALGSIPPSTLMPVCLDVGTDNQALLQDPLYVGARIPRVKGPEYDELVDEFMESAVKCFGNNTFIHFEDFATPNALKFLEKYQLast
1 -107.000PF00390.19; Q9U1J2_DROME/102-283; Malic enzyme, N-terminal domain  ali  100  1HHRHRRLYYRFIKENIEKSLPIVYTPTVGDVVATYGLNFQQAISLFISIHDKGHIRDLMHNWVDEGVKAICVTDGGRVLGLGDMGANAMGISLGKMILYTALGSIPPSTLMPVCLDVGTDNQALLQDPLYVGARIPRVKGPEYDELVDEFMESAVKCFGNNTFIHFEDFATPNALKFLEKYQ 182
2 -7.200PF18759.1; A0A067MG99_9HOMO/239-548; Plavaka transposase  ali follow..  7  30..ETFDIYFRDVIACVRALYS---SPDFG------TVLIFVPEKHYEDKEMTKRLYHDMNT-GATIVPIIISSDKTQLTLFGNKSAYPVYMTIGNLPKEFRRKPSHQGQVLLAYLPTTRLEHIKNKA------SRRRTVANLFHACMRRILAPLTDAGVDGINMASGDGVIRRVHPIFATF. 205
3 -6.870PF18441.1; M5X724_PRUPE/214-349; Hen1 La-motif C-terminal domain  ali follow..  13  4..........................................EAINVPSSLEKTVERVILNVSSSGYFLDVIAKQ---LGLSKTSDVLISRPMGKASSETRLYFAAPKQYL---LDMSSDLLNAKEACNSEGSLNARASYLSGQDIYGDAILASIGYTWRSKDLFYEDVTLQSYHRMV.... 133
4 -5.760PF07386.11; K9XGC2_9CHRO/57-168; Protein of unknown function (DUF1499 topsan)  ali follow..  16  18.............DTAHQIAPLTYNSTDQEAMARLKTVLQSFRRVKAIAQSENYIYSEFTI--VDDVEFLLDKDAKVILGEGDLGVNRRRVETIRTKF.................................................................................... 112
5 -5.600PF15064.6; F1RKJ0_PIG/1-950; Cation channel sperm-associated protein subunit gamma  ali follow..  12  749.DKGTIYSFSVFLTARGHAFDLEDQSASSQPGSQVG--------LAVVLADPACIEAVVKQKDLINRNSVTLSDKRTCF---DQGISGHHLMKTSMLIKVRSEPGGEDGNLMVPLLIGCPPGKRLAFDITYTLEYNRLQNKHYFDCVDPEMPCFLFRDIFYPFFLIQDLVTGDSGSFQGSY. 919
6 -5.530PF18014.1; A0A060LPQ8_9BACI/150-269; Acetyltransferase (GNAT) domain  ali follow..  15  14.......................................................EGFLQDRIKQASKAYVLIKDEGIVGYGLAIDTPYNRIIGPLICNTEEGAIDLIRALRVRIDMPEKRERVEAFLQKAGFSL............................................... 99
7 -5.320PF04876.12; NCP_RSVT/5-177; Tenuivirus major non-capsid protein  ali follow..  15  15...DYTLLYDTLPETVSDTLPDLKDPERVTE-DTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSH---LLGGEDDDNALIDIGLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDTEEYEKVWKKM................................ 159
8 -5.290PF00450.22; SCP38_ARATH/68-480; Serine carboxypeptidase  ali follow..  15  20EPATRFLYYYFVAIKPSKSTPLVLWFNGGPGCSSVGFGAFEELGPFRVHSDGKTLYRNPYSWNNEANMLFF----EGPISVG---FSYSSTPFDWEIFGEQADKLTAEDNYMFLVNWLERFPEYKGRDVYIS-------GQSYAGHYIPQLAQIILHRNNQTFINLRGISIGNPG....... 181
9 -5.260PF07663.11; R6VUN3_9FIRM/240-332; Sorbitol phosphotransferase enzyme II C-terminus  ali follow..  24  2...........................................................................SPILGPGAVIAQVVGTLLG---AEIGLGNIPAQYALPALFAI---NAQVGGDFVPVGLSLGEAEPETIEFGVPAVLYSRVITGPLAVIIAF................ 86
10 -5.250PF10941.8; Q9KF97_BACHD/1-116; Protein of unknown function DUF2620 topsan  ali follow..  17  10..................................................DKKEIESLIQEKAGERVETIVKSDLDAAMAIKSNEADGACHTGGGGALAMAIAILGKNRCATISMPGKPPVKEEVDNAVQQGAKAFGFTGDHKERAVEYLIESL............................ 116
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;