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Query: PF00899.21; SAE2_HUMAN/11-443; ThiF family, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst LAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKGVTECYECHPKPTQRTFPGCTIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPEAAWEPTEAEARARASNEDGDIKRISTKEWAKSTGYDPVKLFTKLFKDDIRYLLTMDKLWRKRKPPVPLDWAEVQSQGEETNASDQQNEPQLGLKDQQVLDVKSYARLFSKSIETLRVHLAEKGDGAELIWDKDDPSAMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNPNCYVLast
1 -130.000PF00899.21; SAE2_HUMAN/11-443; ThiF family  ali  100  1LAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKGVTECYECHPKPTQRTFPGCTIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPEAAWEPTEAEARARASNEDGDIKRISTKEWAKSTGYDPVKLFTKLFKDDIRYLLTMDKLWRKRKPPVPLDWAEVQSQGEETNASDQQNEPQLGLKDQQVLDVKSYARLFSKSIETLRVHLAEKGDGAELIWDKDDPSAMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNPNCYV 433
2 -38.900PF10585.9; W4Z0R6_STRPU/636-883; Ubiquitin-activating enzyme active site  ali follow..  15  1........................................................................................................................................................................PNAIEHTIQWARDMFEGLFRNPAENAAQYGTDPKFMERTLKMPGCQPIEVLELLKRALIDDRPKSLEDCISWTRHHFESQFVNQIKQLLSGAPFWSPKRCPHPLLFNPDNDMHLSYIVSTSNLLAAVYQAAAEANADDARLREIVDSLPTPEQLKQITIKPLDFEKDDDTNFHMDFIVATSNLRAENYGISPSDKHKTK.................................................................. 248
3 -11.000PF03446.15; Q8FTI1_COREF/15-184; NAD binding domain of 6-phosphogluconate dehydrogenase  ali follow..  12  1........QIGVVGLAVMGSNLARNFARNGH-TVAVYNRSTDKTDKLISDYATDGNFIPTKTVEDFVAALEKPRRAIVMVQAGAATDAVINQLDAMEEGDIIIDGNALYTDTVCREKEMAARGRHFISGGEEGALNGPSIMPGGPKESWEALGP....................................................................................................................................................................................................................................................................................... 151
4 -9.540PF00056.23; MDH_CHLAA/3-142; lactate/malate dehydrogenase, NAD binding domain  ali follow..  13  2........KISIIGAGFVGSTTAHWLAAKELGDIVLLDFVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTNSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL................................................................................................................................................................................................................................................................................................................... 120
5 -9.430PF02558.16; Q9K9R6_BACHD/6-154; Ketopantoate reductase PanE/ApbA  ali follow..  17  1.........VAVIGSGSIGLLLYAYLKLAN-WPALLVTNRPEQADHLNKEGLTFVAKSGEHQPI--------------------SVTATPLSSFSAEEAEVGFITVKSFAVKALLPQLQRKKWDGLV.................................................................................................................................................................................................................................................................................................................. 97
6 -9.370PF00670.21; SAHH_DICDI/191-351; S-adenosyl-L-homocysteine hydrolase, NAD binding domain  ali follow..  16  20...MIAGKVAVVAGYGDVGKGCAQSLSKMGA-RVLVTEIDPINALQACETAAPLSNIF-GCRDIVRGEHFAVMKEDAIVNIGHFDCEIDVAWLNANAKKDTVKPQVDRYTLANGVHIILLAEGRLVNLGCGTG............................................................................................................................................................................................................................................................................................................ 161
7 -9.100PF07991.12; ILVC_METAC/15-178; Acetohydroxy acid isomeroreductase, NADPH-binding domain  ali follow..  10  1....LKDKTIAIMGYGSQGHAHARNLHESGL-NVVVGLRKGSSSWAKAESDGLKVMTVEEKAADVIMILLPDEKQASVYYSQIEPSLEAGNALVFAHGFNIHYNQIVPPKDVDVFMVAPKGPGHIVRRTYTEGVPGLIAVYQDATGKARD........................................................................................................................................................................................................................................................................................... 149
8 -8.560PF00208.21; DHE3_ORYSJ/176-408; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase  ali follow..  14  25YSESISGSTFVIQGLGNVGSWAAKLIHQKGGKIVAVGDVT-IDIPALLKHRSEGGSLEDFYGAEMDAAELLVHECDVLVPCALGGVLNRENAAEV--KARFIIEGA-NHPTDTEADEILAKKGVIVLPDIYANSGGVVVSYF................................................................................................................................................................................................................................................................................................... 171
9 -8.390PF01488.20; HEM1_PSEAE/169-304; Shikimate / quinate 5-dehydrogenase  ali follow..  16  6IFSDLHRSQALLIGAGETITLVARHLFEQGVKRIVVANRTLERASLLAEQF-LSEIPEELANSDIVISSTASQLPILGKGAVERALKQRKHKPMFMRDIEPEVGELDDV.................................................................................................................................................................................................................................................................................................................................... 125
10 -8.330PF10100.9; H6NF63_9BACL/6-429; Staphylopine dehydrogenase  ali follow..  12  1.......NRVLILGTGPASVQLAVTLKNKWNCCIGIAGRESVRSEPFFTALDESGRRV---RADIQNEKHQAMQGECIVDHVFQGYG------TITGEWDTLILAVTTDAYVAVLKQI........................................................................................................................................................................................................................................................................................................................... 102

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.