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Query: PF01488.20; HEM1_PSEAE/169-304; Shikimate / quinate 5-dehydrogenase, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst SLAKQIFSDLHRSQALLIGAGETITLVARHLFEQGVKRIVVANRTLERASLLAEQFGAHAVLLSEIPEELANSDIVISSTASQLPILGKGAVERALKQRKHKPMFMVDIAVPRDIEPEVGELDDVYLYSVDDLHEVLast
1 -71.700PF01488.20; HEM1_PSEAE/169-304; Shikimate / quinate 5-dehydrogenase  ali  100  1SLAKQIFSDLHRSQALLIGAGETITLVARHLFEQGVKRIVVANRTLERASLLAEQFGAHAVLLSEIPEELANSDIVISSTASQLPILGKGAVERALKQRKHKPMFMVDIAVPRDIEPEVGELDDVYLYSVDDLHEV 136
2 -14.800PF07991.12; ILVC_METAC/15-178; Acetohydroxy acid isomeroreductase, NADPH-binding domain  ali follow..  20  1.........LKDKTIAIMGYGSQGHAHARNLHESGL-NVVVGLRKGSSSWAKAES---DGLKVMTVEEAAKAADVIMILLPDEKQA.................................................. 73
3 -14.600PF10727.9; Q743Y6_MYCPA/8-128; Rossmann-like domain  ali follow..  12  3..........ARLKVGIISAGRVGTALGVALERADHVVVACSAISHASRQRAQRRLPDTPV--ATPPEVAAGAELLLLAVPDSELAGLVSGLAATEAVRAGTIVAHTSGANGVGI..................... 105
4 -14.000PF01262.21; Q9S227_STRCO/141-353; Alanine dehydrogenase/PNT, C-terminal domain  ali follow..  15  24.......PGVLAGRAVVIGGGVSGWNAAQIAIGLGFHVTLLDKDITKLREIFGTKIQTVVSNAFELEKACLEADLVIGAVAKAPKLVTNELVSRMKPGS-----VLVDIAIPTTHAEPTFPVHNSVFYCVANMPG. 163
5 -13.700PF02423.15; Q2YIG4_BRUA2/15-320; Ornithine cyclodeaminase/mu-crystallin family  ali follow..  13  111AVAAKHLAPKNARTMAIIGNGAQSEFQALAFKALGVDKLRLYDLDPQATAKCIRNLQGAGFNIKSVEEAVEGADIITTVTAANATILTDNMV------GAGVHINAVGGDCSTELHGDILRRSDIF---VEYPPQT 245
6 -13.300PF03435.18; Q94BZ0_ARATH/41-165; Saccharopine dehydrogenase NADP binding domain  ali follow..  17  1..............VLVLGGGRVGGSTATALSKLCPEKIVVGGRNREKGEAMVAKLGENSEFSKMLETSLRDVDLVVHAAGPFQQAPRCTVLEAAIKTKTA----YLDVCDDTSYAFRAKSLEA............ 115
7 -12.500PF00670.21; SAHH_DICDI/191-351; S-adenosyl-L-homocysteine hydrolase, NAD binding domain  ali follow..  12  12GIKRATDVMIAGKVAVVAGYGDVGKGCAQSLSKMGARVLVTEIDPINALQACMDGY-----QIVTMETAAPLSNIFVTTTGCRD-IVRGEHFAVM-----KEDAIVCNIG.......................... 110
8 -11.500PF10100.9; H6NF63_9BACL/6-429; Staphylopine dehydrogenase  ali follow..  13  1............NRVLILGTGPASVQLAVTLKNKWNCCIGIAGRESVRSEPFFTALDESGRRVQGYGTITGEWDTLILAVTTDAYVAVLKQIHGELLKRVRCMLLL.............................. 116
9 -10.600PF16912.5; I7BJ28_NATSJ/144-370; Glucose dehydrogenase C-terminus  ali follow..  19  30..........QPASALVLGTGSLGLLTAAMLTETLEYDRVYCKDRPHPTIDIVDRLGATYIPVSEIPAAYEPMDLVYEATGYAKHA------EAIEALAPNGVAALLGVPEDWAFEVDGG................ 142
10 -10.400PF00056.23; MDH_CHLAA/3-142; lactate/malate dehydrogenase, NAD binding domain  ali follow..  16  1............KKISIIGAGFVGSTTAHWLAAKELGDIVLLDFVEGVPQGKALDLYDVRVTGTNNYADTANSDVIVVTSGAPR--ITRACISQAAPLSPNA--VIIMVNNPLDA..................... 122
11 -10.400PF13241.6; Q2FTK6_METHJ/4-113; Putative NAD(P)-binding  ali follow..  11  1.....LMIDFTGKKVIIFGGGVIGARKAR-YFAYEADVLVYSRSFHPEFQEIPVRVCNLTGDLEILRNMIHDASLVIAATSDPE-------LNELIESACAREHIWCNVAAGKRGD.................... 105
12 -10.000PF03446.15; Q8FTI1_COREF/15-184; NAD binding domain of 6-phosphogluconate dehydrogenase  ali follow..  14  1.............QIGVVGLAVMGSNLARNFARNGH-TVAVYNRSTDKTDKLISD-DGNFIPTKTVEDFVAALEKPRRAIVMVQAGAATDAVINQLADAMEEGDIIIDGG-YTDTVCREKEMAARGRHFVG..... 121
13 -9.750PF05221.17; D9SB20_FIBSS/15-498; S-adenosyl-L-homocysteine hydrolase  ali follow..  18  245GINRATDVMMAGKIAVVCGYGDVGKGCAQSLRGQGA-RVIITEIDPICALQAAME----GYEVKTLDEVVSYADIFVTTTGNTG-IISAAQMEKM------KNRAIVGNIGHFDNEIDMAGLKKI........... 357
14 -9.510PF03807.17; Q21544_CAEEL/2-98; NADP oxidoreductase coenzyme F420-dependent  ali follow..  19  1.............KIGFIGAGKMAQALARGLINSGRDNIIASSPKRDEVFLDQCKALGLNTTHDN-AEVVQKSDVVFLAVKPVHVSKVASEIAPALSKEH----LVVSIAL......................... 96
15 -9.000PF02558.16; Q9K9R6_BACHD/6-154; Ketopantoate reductase PanE/ApbA  ali follow..  12  1..............VAVIGSGSIGLLLYAYLKLAN-WPALLVTNRPEQADHLNKE---SVTATPLSSFSAEEAEVGFITVKS----FAVKALLPQLQRKKWDGLVFFQNGM......................... 103

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Alonso A, Rahmouni S, Williams S, van Stipdonk M, Jaroszewski L, Godzik A, Abraham RT, Schoenberger SP, Mustelin T. Tyrosine phosphorylation of VHR phosphatase by ZAP-70. Nat Immunol. 2003 Jan;4(1):44-8. Epub 2002 Nov 25.