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Query: PF01504.18; M0SYZ3_MUSAM/430-736; Phosphatidylinositol-4-phosphate 5-Kinase, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ICGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKSEVKVLLRMLPAYYNHVRAFENTLVTKFFGLHCVKLTGATQRKVRFVIMGNLFCSEYPIHRRFDLKGSSHGRTTDKPEAEIDENTTLKDLDLNFIFRLQKSWFQEFHRQVDRDCEFLEQERIMDYSLLVGVHFREASASQETDGYVASAQIHLLPSPSPSSSAHKLDQDLVEFYDLNLGWHVWASIKLGANMPARVELIVRRTDGESLLIMEPTGEFTDVILYFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPKQYSKRFRDFIYKVLast
1 -127.000PF01504.18; M0SYZ3_MUSAM/430-736; Phosphatidylinositol-4-phosphate 5-Kinase  ali  100  1ICGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKSEVKVLLRMLPAYYNHVRAFENTLVTKFFGLHCVKLTGATQRKVRFVIMGNLFCSEYPIHRRFDLKGSSHGRTTDKPEAEIDENTTLKDLDLNFIFRLQKSWFQEFHRQVDRDCEFLEQERIMDYSLLVGVHFREASASQETDGYVASAQIHLLPSPSPSSSAHKLDQDLVEFYDLNLGWHVWASIKLGANMPARVELIVRRTDGESLLIMEPTGEFTDVILYFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPKQYSKRFRDFIYKV 307
2 -7.530PF15935.5; I5B0B2_9DELT/91-316; RNase LS, bacterial toxin  ali follow..  7  1.......................HNNCITYRKIKQDDFELLLEYLDTIFKISSIYKDETTLTQYANQTILLQGRPLY---YNVIKSFINELIDFDQVVEIESDLYKIDLKPDVVREELESRLFAV------RFDEKILKVMTPAL---SLMKIDVELEDYSCCI............................................................................................................................................... 151
3 -7.520PF13095.6; Q2GMK8_CHAGB/10-214; Kinetochore Sim4 complex subunit FTA2  ali follow..  15  25....QLVNELGNPGQDGRVWEVKIRGKYALKMFMFCEFDPFNCECRAYGRLKEENQEHLAVRSHG---------------YLLLTHAQELEITRFITGTEDDRDDLRERTEKDCNLPVRAIVKDL-----VKGGHPFAAEQISQMWADLKALHELGIMDFSR................................................................................................................................................. 203
4 -7.130PF00623.20; Q18566_CAEEL/354-521; RNA polymerase Rpb1, domain 2  ali follow..  17  45....EKMRQLVINGSDGANYLVEKKTKKLLKYGKRDELAKNLRMGDTIERHLDDNDVVLFNRQPSLHKISIMSHRAK----VMPGRTFRFNECACTPYDFDGDEMNLHLPQTYEAKAEASEL......................................................................................................................................................................................... 165
5 -6.510PF16034.5; U3K4P9_FICAL/415-612; JAKMIP CC3 domain  ali follow..  13  30......FDEESVDSETSSVTSYNTDEEDLEDSTPKEEAELRFCQLTREYQALQRAYALLQEQVGG----TLDAEREARTREQLQADLLRCQAKIE---DLEKALIEKGQDSKWVEEKQLLIRTNQELLEKIYRMEQEEHQLKNEMQ---DAKDQNELLEFRVL................................................................................................................................................ 185
6 -6.310PF07688.12; K9TGJ3_9CYAN/224-345; KaiA C-terminal domain  ali follow..  20  8...................VYYKRNPKRFLRNLPPAERQHFLDELQAEYRD-------------------------------IVLNYFSTDGSLNQKID---------------EMVSTAFLADISVTQIVEIHMDLMDDFSKQLKLEGR--SEEILLDYRLTL............................................................................................................................................... 104
7 -6.130PF00447.17; U5GYQ9_USTV1/99-205; HSF-type DNA-binding  ali follow..  13  2IHKLYSMASLGRSNFDSLIDWTKDGKAFGVS----RPNEFAKVVLPQYFKHSNFASFVRQCNMYGFHKVN............................................................................................................................................................................................................................................. 67
8 -6.090PF08284.11; A0A0P0YB17_ORYSJ/377-511; Retroviral aspartyl protease  ali follow..  14  8....................................................................NHASAEEAQAAPEVVLGTFPVNSIPATVLFD-SGATHSFISKKFVGMHG----LIREELSTPMRVHTPGNSSTSVQFSPSITILILLESKDLDVILGMDWLTK........................................................................................................................................ 115
9 -6.070PF17008.5; H8ZDW6_NEMS1/218-415; Domain of unknown function (DUF5088 topsan)  ali follow..  11  3VILKSRLFTFSSGGSLPLFFSFILTSAGLVKVYVWKLAV-------RKFFCIKEGDYIFIRGF----KIKRRPGALLIADR--MEMLHGLPKVPYDFTTVIGSSLFRYRARMKFREYVYLKVSGI----IIKLLANDTESIIDIKTGTSIEVRHLRKGTIG.................................................................................................................................................. 173
10 -5.900PF00528.22; YHDY_ECOLI/173-362; Binding-protein-dependent transport system inner membrane component  ali follow..  11  6...........................ILLALGRRSHMPIVRILSVIFIEFWRGVP-VLFMSSVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAERGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDL................................................................................................................................................... 142
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;