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current user: public |
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| Query: PF01644.17; M9MCP3_PSEA3/347-509; Chitin synthase, from PfamA32U |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 | |||||||
| # | Score | Template | Links and tools | %id | First | MYNEDEVLFCRTFHGVMKNIAHLCSRNKSRTWGKDGWKKVVVAIISDGRKKIHPRVLDCLAALGVYQDGVAKNMVDGKEVQAHLYEYTTQLSIDSNLQFKGAERGLVPMQIIFCLKEKNAKKINSHRWFFNAFCPILQPNVTILLDVGTRPENKSIYYLWKSF | Last |
| 1 | -110.000 | PF01644.17; M9MCP3_PSEA3/347-509; Chitin synthase | ali | 100 | 1 | MYNEDEVLFCRTFHGVMKNIAHLCSRNKSRTWGKDGWKKVVVAIISDGRKKIHPRVLDCLAALGVYQDGVAKNMVDGKEVQAHLYEYTTQLSIDSNLQFKGAERGLVPMQIIFCLKEKNAKKINSHRWFFNAFCPILQPNVTILLDVGTRPENKSIYYLWKSF | 163 |
| 2 | -23.400 | PF03142.15; I1BPR1_RHIO9/526-1047; Chitin synthase | ali follow.. | 15 | 27 | CYSEGEEGLRTTLDSLANADYPSSHKMLGIITGSGNGKSTPDIVLSMMKDELVPKEKAQPYSYVAISDGVKR--HNKAKVYAGYYKYTDSDDARFPFTPEEKQQRVPTEAEAKEKKPGNRGKRDSQVILMNTMQKIFRFETCLMVDADTKIYPDSLARMIACM | 225 |
| 3 | -8.450 | PF13641.6; A4XR32_PSEMY/86-342; Glycosyltransferase like family 2 | ali follow.. | 12 | 10 | SFRIEALTTAMVYRSVIREAI------------DCGYPSTLVCSIVEL-------------------------------------------SDELLIKNLWAQAQPPEHVKLDIVRIPGTGKRDGLAHGFRAISRQMRDAVVAVIDGDTVLEPGVVRKSVPWF | 119 |
| 4 | -7.250 | PF14642.6; F7IBJ2_CALJA/1-253; FAM47 family | ali follow.. | 17 | 29 | .................................................................................................................RFGKLKLPPPNTENWIF................................. | 45 |
| 5 | -7.110 | PF08642.10; T4ZWG0_OPHSC/258-385; Histone deacetylation protein Rxt3 | ali follow.. | 13 | 1 | ...........TVKVHLSPPAREEITARAYLWGTDVYSDVMAACIHGGWVKGEWAEDFDSATFDLDDGGPRRKPKNRANESLDLESEGLITSPPQSGPLSIPNNRDLHVNVLILYAATTRFGIASREF................................... | 128 |
| 6 | -6.640 | PF05060.14; W5LSP2_ASTMX/89-441; N-acetylglucosaminyltransferase II (MGAT2) | ali follow.. | 9 | 33 | QVHNRPEYLRLLVESLRK---------------AKGIENVLLIFSHDFWSQEINQVVSSIDFCLVLQIFFPFSIQLYPHEFPGNDPRDCPRDISKKDALKLGCINAEYPDSFGHYREAKFSQTKHHWWKLHFVWDRVHKGLVLLIEEDHYLAPD-FYHVLKLM | 185 |
| 7 | -6.630 | PF10845.8; Q773J2_NPVR1/9-56; Protein of unknown function (DUF2576 topsan) | ali follow.. | 20 | 9 | .HDYDRDQIKRELNSLRRNVHDLCTRSGTSF.................................................................................................................................... | 38 |
| 8 | -6.360 | PF10495.9; I3M8C0_ICTTR/3526-3606; Pericentrin-AKAP-450 domain of centrosomal targeting protein | ali follow.. | 10 | 3 | .........................LRAESFRKALIYQKKYLLQLLGEFQECEDATITLLARMGGQPAFTNLEFISRPKGLSRFRS------------------------AVRVSIAISRMKILVQRW................................... | 81 |
| 9 | -6.300 | PF03556.15; H3F2H7_PRIPA/93-203; Cullin binding | ali follow.. | 9 | 9 | ......................................................................LDQGLRDPVGFELVYKFAFGYGKRPGSRNLDLDYAIPFWRILFFMEKVNKKAVTKDLWQMFEFATTVKTDFSDYDEEASWP............ | 102 |
| 10 | -6.050 | PF00535.26; Q19421_CAEEL/9-186; Glycosyl transferase family 2 | ali follow.. | 9 | 6 | AKNVEK--LRETLNGLLDQT--------------CENSKIEICLADDGSVDDTVRILENARLEFEEMGM----------------------------------------NVVVTHVPQPGGVGAAK----DCAVRSSKGRYLCFNDADDVSSPNRIKSQLELA | 110 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80. |