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Query: PF01987.17; B1L4K3_KORCO/3-207; Mitochondrial biogenesis AIM24, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst YEIRYRPSYSMLVVKLNQGETITAEAGAMTYMTPNIQMKTRARAGVLDTIKLGVLGGQSFFVNDYTAVGGPGEVALASAPLGDIEKLTLDGRGYIIQRSSYVASDPTVELDIKWQGFTKGIFGQGLFMIKTSGRGNLFINTFGAIDRHELSAGESLIVDNFHLVAFSDTCSYEVRRMGGLKELALSGEGLVVEVRGPGEVLIQTKLast
1 -84.900PF01987.17; B1L4K3_KORCO/3-207; Mitochondrial biogenesis AIM24  ali  100  1YEIRYRPSYSMLVVKLNQGETITAEAGAMTYMTPNIQMKTRARAGVLDTIKLGVLGGQSFFVNDYTAVGGPGEVALASAPLGDIEKLTLDGRGYIIQRSSYVASDPTVELDIKWQGFTKGIFGQGLFMIKTSGRGNLFINTFGAIDRHELSAGESLIVDNFHLVAFSDTCSYEVRRMGGLKELALSGEGLVVEVRGPGEVLIQTK 205
2 -7.140PF11765.8; M3JXM0_CANMX/11-341; Hyphally regulated cell wall protein N-terminal  ali follow..  8  29............DITIKSGAYWSIINNAISAFVGKLDVQEN--GGLYISSTSPILALHVTLTSLLDTINNDGTIVFDSRASLTAAGYNLVGYSF-NNTGSMFLAASGILSSTMSLTAISWTNSGLIVFSTITNNGQICLIHEVFVQKTKINGDGCITADQNSTIYISNALNFYLADSHSSIVAQAISTSQTFNVYGFG....... 234
3 -6.380PF11142.8; E5AMG8_PARRH/67-124; Protein of unknown function (DUF2917 topsan)  ali follow..  16  23.....................................................................................................................................GERVWITRSADEHDYWVAPGESLSLRPGELMWLGTE.................................... 58
4 -6.130PF10988.8; Q82V75_NITEU/79-237; Putative auto-transporter adhesin, head GIN domain  ali follow..  11  33..................................................................................ESVEVNSSDGELIIRRPGPGNDNLNVIVESISLQKLKISGAGSTLSVRKSGAGSINIEGQASTLKLNLSGAGNTTARD-------TVDNVEIDATGAGNIAVCAKKSVAGSLAGAVHFKVYCN 158
5 -6.130PF05506.12; D0IUW9_COMT2/559-647; Domain of unknown function (DUF756 topsan)  ali follow..  11  11....................................................................................................................TSARCQANSQVELVFANTGTQAAVFHVYDRYKLDRTPRRYMVEAGKTL--SDTWDAVRDNFGKYDLWVLGPNGFHRHFKGD........ 89
6 -5.900PF04832.12; Q3A4V9_PELCD/29-209; SOUL heme-binding protein  ali follow..  13  15YEVRQYESYLLAEARIPSGVDDPLREGQKIKMTAPVLQEGGAAEKIPMTKPVLSLREQNVSVVSFVLPADYTLQTTPLPENPGIQICEIASRRVAVIR--FSGYASDEIIDKQSKRLISFLMRDG-----LKTKGAFMAAYYNPPWTPPFMRRNEVMVD.............................................. 181
7 -5.670PF06560.11; Q8ZMP7_SALTY/31-215; Glucose-6-phosphate isomerase (GPI)  ali follow..  9  86..................................................................................................................................IKGTAAYILQVVDDLIVAVVKEGQSIIVPPNYGHCSINIGDGPLVFSNLAYKPCTVHYDTVQFYHGMACYIVEEN 172
8 -5.540PF07202.13; C3YDC5_BRAFL/3-178; T-complex protein 10 C-terminus  ali follow..  9  1...................ENVLKDGRRVITFSNGTRKEISADGQ----------------TLIVTFCNGDIKQIMPDQRVIYYYAEAQTTHTTYPDGLEILQFPNSQMEKHYPDGTKEITFPDQTIKYLFPNGDEESIFQDGTVLRVSKSGDRVVEFANGQREIHTLNYKKREYPDGTVKTVYPDGKQETRYSNGRGNIVVDK. 176
9 -5.520PF13539.6; E6UJ18_RUMA7/115-195; D-alanyl-D-alanine carboxypeptidase  ali follow..  9  1...................................................................................................................................AGTQELSMHALGRAIDINPLYNPYIVGEK----ISPSNSLEYVDRGAEFPHKIDHHDLAFKVFTCKGWLW.... 66
10 -5.460PF13349.6; Q8Y9D1_LISMO/52-365; Putative adhesin  ali follow..  13  131...MATSSGDLTLSNIKANSSIETDSGKTELTNLTGDLEVNGGSGDVN---------AGVKAKKLKIAIDSGDIELTSGTVTDLAVLTTSSGDIDANTKGKISDSGSIELAGATNNVTAKTSSGDIDVAFTKQVKNIEINSDSGEVELELPGDFKAIYEASS----SGSVKAPTSDS--------NTDNRVTVKTSSGDIKIE.. 314
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98.