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Query: PF02010.15; Q6IVD6_STRPU/655-1134; REJ domain, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst AEVNIDCVMAASTHYEWLVFKLNDVFTVPVDENLYQLPASIRTDLTTLYVPAFTLEYGTYVFRLHVTINLRDGSVGVNKNDQTYIRVVESPLYAVINGGSSRAIGWYRDIYMDGSLSKDPDVDGNQDGLLFSWFCRRSNETFPSNDDLLLLVNQPSGDDGCLHEGFLMQSGNQTTMTIAGQTLEGNQTHVFRLVVSKQGRGTAHAEQTIPILPGDPPTILIKCMTNCGFSLNPSERFVISANCDDCTLQTRPRYFWSLIPAFLNNSKQFLIWNQDTTTSRTNAYLAIRAFTFQGSEEYTLKVLVFSWSGAKTFAEYAFSTNSPPLLGTCSATPDEGVVLETHFTIICQGFVDEDEPLSYEVRALTGSEKKTGISSFHDSSTSGTLIYFGVDPHIPPTFLPVGIASHCDHQVDIIITVSDTYGASIKTSTAVKVREAEVDTSQPDKTVTDTVLEFSSGEENPLSKLLESGDTQSATQLVFTLast
1 -144.000PF02010.15; Q6IVD6_STRPU/655-1134; REJ domain  ali  100  1AEVNIDCVMAASTHYEWLVFKLNDVFTVPVDENLYQLPASIRTDLTTLYVPAFTLEYGTYVFRLHVTINLRDGSVGVNKNDQTYIRVVESPLYAVINGGSSRAIGWYRDIYMDGSLSKDPDVDGNQDGLLFSWFCRRSNETFPSNDDLLLLVNQPSGDDGCLHEGFLMQSGNQTTMTIAGQTLEGNQTHVFRLVVSKQGRGTAHAEQTIPILPGDPPTILIKCMTNCGFSLNPSERFVISANCDDCTLQTRPRYFWSLIPAFLNNSKQFLIWNQDTTTSRTNAYLAIRAFTFQGSEEYTLKVLVFSWSGAKTFAEYAFSTNSPPLLGTCSATPDEGVVLETHFTIICQGFVDEDEPLSYEVRALTGSEKKTGISSFHDSSTSGTLIYFGVDPHIPPTFLPVGIASHCDHQVDIIITVSDTYGASIKTSTAVKVREAEVDTSQPDKTVTDTVLEFSSGEENPLSKLLESGDTQSATQLVFT 480
2 -10.900PF16319.5; Q89YS0_BACTN/7-726; Domain of unknown function (DUF4958 topsan)  ali follow..  12  196..........................................SDKGEISIIKGNIQPGKYILSFKLTTAATGEDPEKGIENALEINVTSRPLSLIYTPDEGKIEEEGERSPETTFQSNIPALKGSAEGLVYS-------------------------SSVSPNTDKITIDPTTGVLSVAAHGFKDGEKYQISVKAINEFSPEGVVVFTLNTVEFIEPIANFG------ADVNDVQAVEIDINKNENFKGDEVKYEFVNLPTDLQG----------ELALDLDGNIAIKKGNKIPVGQYTVQVMATNTKGSE-TATFTLTITANPNGNNLGLTPIENYADQFRIVPTATDAKDGLSSLKWEVELKHNPNNTKATI----------------NESTGQITI-TGLKQGQCGMVMVTATAGEG-KTAVSVKQPVFFHFSMISDSNVQLEYTPFVFQVNPARGESIAPSLGAGIDKSTFRL... 598
3 -8.290PF09067.10; Q6UAP7_TETNG/33-133; Erythropoietin receptor, ligand binding  ali follow..  12  9.................................................................................................................................................................................................................................................................................................................................EDPKNPKCFAEGRK--------DFICF-WERAGSVDQYTFTYAYQNENSSRCPLKSISA--------ADSKRLFICHLN---RIKMFVQMDIQVHREGMLIHNRSLLVE.................................................. 101
4 -7.690PF17972.1; A0A0L7SYS8_9GAMM/482-607; Bacterial Alpha-2-macroglobulin MG5 domain  ali follow..  12  1.......................................................................................................................................................................................................................................................................................................ERMALSLKADERPLLPS-DDVTFQANGRYLYGA----PAAGNRLQGQLFLRPDREAVAALP-GYQFGDITEEGLKRSLDELDQTL---------DADGNTTVAVESGWKEVHSINLILQASLLETGGRPVTRRVTQSIWP............................................. 126
5 -7.660PF13750.6; A0A0G3Q3C4_KLUIN/549-705; Bacterial Ig-like domain (group 3)  ali follow..  11  4..............................................................................................................................................................................TIAYDLSRQSEG-KYNVEVNIRDFFQNQTNKTFGEIALDNTPPTVAIFDGKPVKDDTVVYGLENLRIALADNLTTPRIT---RLQLVGGPTADNVELTWSPAGKDTYMPEYPRLFPNFEPSENYSISVTVADSQSNTKTYTQKFSYLPNNLVQLHNL..................................................................................................................................................... 156
6 -7.620PF15418.6; Q5LII3_BACFN/21-149; Domain of unknown function (DUF4625 topsan)  ali follow..  11  10................................................................................................................................................................................................................................................................................................................................TIKPV----LLEPEEGAILRHGVHFEMN--HDNEAIASYKINIHNNFDGHSHTRASEAGITKPFTFQKDAYVHNHDIKIPADATPGN---YHLMVYCLDQSGNETYVVRNIVL............................................... 129
7 -7.530PF12245.8; W8CUG4_RAOPL/139-263; Bacterial Ig-like domain  ali follow..  12  1..................................................................................................................................................................................................................................................................................................................................GPTSDNLSII-ELGLGAEQKLYVNVNNVKAATGFDKATLQVINPDNSVYSITDMDDGGSSSLSAPWTLGERKKASWMP---TSDADVEFRFRVTLYDKAGSRKVLPDQ.................................................. 119
8 -6.910PF17964.1; W5WMI9_9PSEU/50-235; Bacterial Ig domain  ali follow..  11  1...................................................................................................................................................................................................................................SKDITVNTKLTLTAS------------------KVGEVKLVGKSGTPVEGRPSDDGKTWTSTGRLEFGETYSYEGKALNADGKATELRGSFSTVAPGTLVRGMLNIDDNGTVGIAAPII----------IQFAGHVEDRVAAEKALSVKSEPATTGAWGWLPDNDTGSRVHWPQNYAPNTKVTVTANLYVPYGQGRYGKDDVTSTFT.............................................. 184
9 -6.900PF08204.11; Q9Q8V0_RFVKA/10-120; CD47 immunoglobulin-like domain  ali follow..  15  29TTITLECNLDNSIHVKWLF-------------YTMDDTISNITNGSFIKFDFAKNLSGNYTCEAYSDLNSVKNVIALN.................................................................................................................................................................................................................................................................................................................................................................................................................. 100
10 -6.890PF09160.10; YDEQ_ECOLI/27-171; FimH, mannose binding  ali follow..  15  35.SQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYK--GSLYWNNVTYPFP----------LTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGE----------VIARIHMYKIATLGSGNPRNFTWN.......................................................................................................................................................................................................................................................................................................................................................... 145
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.