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current user: public |
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| Query: PF02019.18; W5KAT6_ASTMX/58-185; WIF domain, from PfamA32U |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . | |||||||
| # | Score | Template | Links and tools | %id | First | VFMSEEEVKKLLGLDAELYYVRDDVVNNYALSFILPVPSETNSLHFTWHSKSKVDYKLGFHVENPAAMDQPQSNISTQGEVPRTRSVFRVDLFCSGKVDGEAVLTVQLNLTIHANNFTVLNFKRRKMC | Last |
| 1 | -74.500 | PF02019.18; W5KAT6_ASTMX/58-185; WIF domain | ali | 100 | 1 | VFMSEEEVKKLLGLDAELYYVRDDVVNNYALSFILPVPSETNSLHFTWHSKSKVDYKLGFHVENPAAMDQPQSNISTQGEVPRTRSVFRVDLFCSGKVDGEAVLTVQLNLTIHANNFTVLNFKRRKMC | 128 |
| 2 | -8.390 | PF16734.5; B0C6E0_ACAM1/135-243; Type IV pilin-like G and H, putative | ali follow.. | 8 | 1 | ....QDTGHTYLGNSQQAEKLVTGRFTTNLQKLESDSPKDSGEFQLQVLEANENKAIVAAIAKQNGI--------SYTGAVYAQDASIPVSAICKSNEPTQTP......................... | 95 |
| 3 | -7.210 | PF15438.6; AMP_ONYPE/1-195; Antigenic membrane protein of phytoplasma | ali follow.. | 9 | 46 | .............................ALELTAADAADAEKVVKQWKVQN-----------------TSLNAKVTKDSVKVAVADNKVTVTPADAGKALSGSKILNLVGVCELNKLTLGTEKKLT. | 128 |
| 4 | -6.940 | PF16583.5; A9MQ72_SALAR/56-200; Zinc-regulated secreted antivirulence protein C-terminal domain | ali follow.. | 6 | 50 | ...........TLINIDNAVLSPGESATITTLVKDVDGNPINDVMINVATAHQ--------------------GLWDIGPVKKGVGPGEYTQVITYLGNHSETLGVEYSYL................. | 132 |
| 5 | -6.670 | PF09085.10; H0WQ95_OTOGA/112-222; Adhesion molecule, immunoglobulin-like | ali follow.. | 11 | 13 | ....................LVPGVDQEVACTAHKVTPVGSDALSFSLILGDRELEGVQALGSPPQEDEDLLFHVTQRWLLPPLGTPILPNLYCQATMR............................. | 96 |
| 6 | -6.270 | PF14758.6; A4UHS0_PRRSV/295-482; Non-essential region of nsp2 of arterivirus polyprotein | ali follow.. | 15 | 29 | ...NDEQVQVVAGEQLELLAIESAQSSSDSMKENMHNSREDEPLDLSHPAPATTTTLVGEQTPDNPGSDAGAHLVAVRGFVPTGPILRHVE-HC-GTESGDGSLPLDLSFARTLDQPLNLSL...... | 149 |
| 7 | -6.180 | PF14921.6; I3JII9_ORENI/63-285; Adenomatosis polyposis coli down-regulated 1 | ali follow.. | 11 | 2 | ...........................HNIQDRVRITADIPPQLDGTWVSIPNRHFQALQHYYTDSSCEDPSYSLLVRGKIRLRQASWIT----HGATEAEHHLSKVAIVVHSLAAKQRLASRLPSTC | 116 |
| 8 | -6.090 | PF16556.5; G3SZ94_LOXAF/48-198; Interleukin-17 receptor, fibronectin-III-like domain 1 | ali follow.. | 10 | 56 | ....DASILYLKGAELSVLQQDTNERLCVKFEFLSILEHHPKRWRFNFSNEPGEKYEVIVHHLPKPYPYGDPNHQSSNFSVPGEDPRMKITPPCVS................................ | 151 |
| 9 | -5.960 | PF16323.5; Q8A5X7_BACTN/17-123; Domain of unknown function (DUF4959 topsan) | ali follow.. | 6 | 26 | ..................................ISVKNVNGGAIIKYTPSDKAIFTNTRGEQQEVKSSMYVDSLVIEGLGDTQKREVKLSVDRHENYSTPAIVTIE..................... | 106 |
| 10 | -5.900 | PF18001.1; A0A0Q3QSC7_AMAAE/63-160; Interleukin-13 receptor subunit alpha Ig-like domain | ali follow.. | 19 | 1 | .................................VLPPPSNLETLNWTWNAPENLEYSSYIVIDEVPNRKWSKSRFRVTDTFLNEEMRFKVRSECKNANTSEPSQWVEASLL................. | 93 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7. |