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Query: PF02405.16; K9WIJ8_9CYAN/42-253; Permease MlaE, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst LLEQMATVGVGSLNPVILVAVFAGMIFTIQTARELSRFGAVNFVGGAFSLAFCRELAPILTASIVAGQVGSAYAAEIGAMQISEQIDALYMLKTDPINYLVIPRVVACFLMLPILTILALIMGIAGGVFVGMNFYNVPPDVFLNSVHELLEVRDLLNVVLKSLIFGVLIAIIGCSWGLTTKGGAKGVGQAATSAVVTSWISIFMFDFLISLALast
1 -99.400PF02405.16; K9WIJ8_9CYAN/42-253; Permease MlaE  ali  100  1LLEQMATVGVGSLNPVILVAVFAGMIFTIQTARELSRFGAVNFVGGAFSLAFCRELAPILTASIVAGQVGSAYAAEIGAMQISEQIDALYMLKTDPINYLVIPRVVACFLMLPILTILALIMGIAGGVFVGMNFYNVPPDVFLNSVHELLEVRDLLNVVLKSLIFGVLIAIIGCSWGLTTKGGAKGVGQAATSAVVTSWISIFMFDFLISLA 212
2 -8.090PF16629.5; G1N4L7_MELGA/523-813; Armadillo-associated region on APC  ali follow..  25  9..................................................ANIMSPGSSLPSLHV--RKQKALEAELDAQHLSETFDNIDNLSPKA.................................................................................................................... 52
3 -7.110PF11200.8; A7AQJ9_BABBO/2-370; Protein of unknown function (DUF2981 topsan)  ali follow..  18  2..........QGLFYIAIQQFLLGISL----------------------YSVIHYLHPSLTQLLFGTNAISAVLGFMGALKRNIVMECV---------YLVF--AISLFLIFLTVLDMAELVHLL....................................................................................... 87
4 -7.090PF07147.12; W5PFC1_SHEEP/1-425; Mitochondrial 28S ribosomal protein S30 (PDCD9)  ali follow..  12  319...........................IFRANAIASLFAWTGAQAMYQGFWSEADVTPFVSQAVITGKYFSFFCYQLNTLALTETIEDNDVKGFND----VLLQLVHFLLNRP................................................................................................... 425
5 -7.000PF10752.9; D3FXJ5_BACPE/1-83; Protein of unknown function (DUF2533 topsan)  ali follow..  10  1..........................MSVHLQIAEQVTNHRRAQKEFLALDEKREA--AIDRVVEDAKKGLHISLN--VNAITKEMNQIAQDFYFPPRKEVTTDMV.......................................................................................................... 77
6 -6.920PF05699.14; Q9C761_ARATH/539-624; hAT family C-terminal dimerisation region  ali follow..  17  14...............................................................................MKTFSDMEILSFWKENQHRYGDLASMASDLLSIPITTVASESAFSVGGRVLNPFRNRLLPQN....................................................................... 75
7 -6.830PF05505.12; NCAP_EBOZM/19-734; Ebola nucleoprotein  ali follow..  6  3.YHKILTAGLSVQQGIVRQRVIP-IIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKYLEGHGFRFEVKKRDGVKRLETLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVTVLDHILQKT 240
8 -6.530PF03739.14; A5WBH3_PSYWF/27-466; Lipopolysaccharide export system permease LptF/LptG  ali follow..  9  3MTRQVAS------TTALVLGFLVVLLLGGRMIRYFGIAAEGRLDVGLLFSIIGYNL-PYFLELVLPLSFFIGLMLVFGRLYVDHEMAVLNGSGISRGR-LARLIIPLILVLFVLEAGLSLYG.......................................................................................... 116
9 -6.480PF04086.13; E4ZN70_LEPMJ/26-304; Signal recognition particle, alpha subunit, N-terminal  ali follow..  10  3.......................................................INSLIRDVFIEERIQPQADDAGAKPSYRKDGYTLKWTASKDLGLMFVQSLVHLTWIDKLLNVRALFIGLYGEQLKTERSSVVNCDKFASYFDRQIHELE.......................................................... 105
10 -6.100PF02827.16; F7DJM4_ORNAN/147-215; cAMP-dependent protein kinase inhibitor  ali follow..  18  2......................................................DVESTYADFIASGRTGRRNAASGNPSDLSLKLAELDI......................................................................................................................... 46
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16.