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Query: PF02882.19; FOLD1_ARATH/184-349; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst HPLNVGNLAMRGREPLFVSCTPKGCVELLIRTGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEHITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVEDSSCEFGYRLVGDVCYEEALGVASAITPVPGGVGPMTITMLLCNTLEAAKRLast
1 -91.200PF02882.19; FOLD1_ARATH/184-349; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain  ali  100  1HPLNVGNLAMRGREPLFVSCTPKGCVELLIRTGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEHITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVEDSSCEFGYRLVGDVCYEEALGVASAITPVPGGVGPMTITMLLCNTLEAAKR 166
2 -14.700PF00670.21; SAHH_DICDI/191-351; S-adenosyl-L-homocysteine hydrolase, NAD binding domain  ali follow..  27  5....................CRESLIDIKRATDVMIAGKVAVVAGYGD-VGKGCAQSLSKMGARVLVTEIQIVTMETAAPLSNIFVTTTGCRDIVRGEVMKEDAIVCNIG........................................................ 110
3 -12.500PF05221.17; D9SB20_FIBSS/15-498; S-adenosyl-L-homocysteine hydrolase  ali follow..  23  221..INVNDSVTKSKFDNLYGCRHSLIDGINRATDVMMAGKIAVVCGYGD-VGKGCAQSLRGQGARVIITEIEVKTLDEVVSYADIFVTTTGNTGIISAA-MKNRAIVGNIGHFDNE................................................... 348
4 -10.300PF01262.21; Q9S227_STRCO/141-353; Alanine dehydrogenase/PNT, C-terminal domain  ali follow..  23  25..................................GVLAGRAVVIGGG-VSGWNAAQIAIGLGFHVTLLDKDIFELEKACLEADLVIGAV-APKLVTNELVKPGSVLVDIAIDQ-GGCFEDSHPTTHAEPTFPVHNSVFYCVANMPGAV-PNTSTYALTNAT..... 177
5 -9.250PF07991.12; ILVC_METAC/15-178; Acetohydroxy acid isomeroreductase, NADPH-binding domain  ali follow..  12  1...................................LKDKTIAIMGYGS-QGHAHARNLHESGLNVVVGLRKGSTVEEAAKAADVIMILLPDEKQASVPSLEAGNALVFAHGFNIHYNQIVPPKDVDVFMVAPKGPGHIVRRTYTEGIGVPGLIAVYQDATGKARDL 150
6 -8.390PF04723.14; Q185M6_PEPD6/4-151; Glycine reductase complex selenoprotein A  ali follow..  20  1...................................LSNKKVLIIGDRDGIPGPAIEECVKTVEGAEVVFSST----------ECFVTAAGAMDLENQNRVKDAAVVILLGAAEAEAAGLAAETVTAGD----------------PTFAGPLAGVALGLSVYHVVE. 111
7 -8.330PF10087.9; H6LKA6_ACEWD/2-91; Uncharacterized protein conserved in bacteria (DUF2325 topsan)  ali follow..  10  1.......................................SIVIIGGNDRMVYQYKDLCKEYHCRAKVFTQMQGAMKKKIGAPDLIVLFTGTVSHKMVNCATFEAKRLNLPLARSHTSSLNALRNILEE...................................... 89
8 -8.020PF01488.20; HEM1_PSEAE/169-304; Shikimate / quinate 5-dehydrogenase  ali follow..  11  1..........................SLAKQIFSDLHRSQALLIGAGETITLVARHLFEQGVKRIVVANRTLEEIPEELANSDIVISSTASQLILGKGAVERALFMVDIAVPRDIEPE................................................ 118
9 -7.300PF13241.6; Q2FTK6_METHJ/4-113; Putative NAD(P)-binding  ali follow..  13  3.................................IDFTGKKVIIFGGGVIGARKARYFAYEADVLV-YSRSFHPEFQEIPVRTEVCNLTGDLE--ILRNMIHDASLVIDPELNELIESACAREHIWCNVAA----GKRGDVVLP....................... 109
10 -7.270PF08759.11; Q8ABR1_BACTN/54-288; Glycosyltransferase GT-D fold  ali follow..  15  115..........................SYIQHCRQIWQGRDLCIIEGEQSRLGVGNDLFDNAQSIERIAFAKYDEIMKAACTVKLVLIALGTATVLAYDLAEVGYQAIDIG-------------------EYEWFLMRAPKKVPVPH.................... 229

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.