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Query: PF02961.14; C3XZ01_BRAFL/2-89; Barrier to autointegration factor, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .
# Score Template Links and tools%idFirst SSTSQKHRDFVGEPMGDKPVTALAGIGGTLGGRLEEEGFDKAYVVLGQFLVLKKNEELFKEWLKSACNANSKQSGDCYTCLKEWCDAFLast
1 -63.400PF02961.14; C3XZ01_BRAFL/2-89; Barrier to autointegration factor  ali  100  1SSTSQKHRDFVGEPMGDKPVTALAGIGGTLGGRLEEEGFDKAYVVLGQFLVLKKNEELFKEWLKSACNANSKQSGDCYTCLKEWCDAF 88
2 -9.500PF11731.8; B3ENR7_CHLPB/7-91; Pathogenicity locus  ali follow..  22  1............DRNRLEKLTDLPNIGPAIAADLRLLGINNPDDLSGQ........................................ 36
3 -8.960PF17191.4; A8F350_PSELT/110-273; RecG wedge domain  ali follow..  9  1..................EIKYAKRVGPRKEAILKKLGISTLGDLIFYFPRDYEDRRKIIP........................... 43
4 -8.350PF04994.13; Q7MJ56_VIBVY/114-195; TfoX C-terminal domain  ali follow..  12  2................PERLKDLPNLRLATERMLKKAGIETVEQLESQ........................................ 33
5 -7.900PF11300.8; L0F544_DESDL/8-135; Protein of unknown function (DUF3102 topsan)  ali follow..  11  1.................RTPQVIATEINMIVHQTKKILLTNAIEI-GRRLKEAKSHGEWGKWLEESVSYSQSTACRLIRICEEYGA.. 71
6 -7.660PF14229.6; C7RPT7_ACCPU/9-129; Domain of unknown function (DUF4332 topsan)  ali follow..  11  46..........ILELANRADLARIKGVSGVYSDLLEKAGVDTVKEL------ATRRPDNLHAKIIDTNTSEQSKQPPTLAMVESWVQQ. 117
7 -7.190PF06514.11; PSBU_SYNE7/45-135; Photosystem II 12 kDa extrinsic protein (PsbU)  ali follow..  11  22.................RAFQQFPGMYPYLASKIVLGGPYDSVDDVLKLDLSDRQREVFEQ........................... 65
8 -6.950PF13399.6; E2Q677_STRC2/476-568; LytR cell envelope-related transcriptional attenuator  ali follow..  21  6..........VRNGTGGDGALPQRGRASEVSALLQGKGFTQA.............................................. 37
9 -6.770PF11798.8; DPO4_TREDE/168-199; IMS family HHH motif  ali follow..  32  8..............MKSLPLKDVWGVGGKTRERLIAAGL................................................. 32
10 -5.770PF18221.1; Q2M051_DROPS/5-98; Mutator 2 Fork head associated domain  ali follow..  17  33ESMELFHAMAIVYRAGVLRVNALMGKVFVNGLENGNVDISRKDAIDGKVKL..................................... 83
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 4 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;