|
|
|
current user: public |
|
| Query: PF03412.15; Q48872_LACSK/4-142; Peptidase C39 family, from PfamA32U |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . | |||||||
| # | Score | Template | Links and tools | %id | First | RKIYIPQVDEMDCGVAALAMILKHYGSSASLAYLRNEAKTDLEGTTALGLVKTAENLGFETKAIQADMSLFEVADLPFPFIAHVLKNGELLHYYVVLGIKKDAIIIADPDPTVGIAKMTQSQFKSEWTGVALFIAPKPS | Last |
| 1 | -92.800 | PF03412.15; Q48872_LACSK/4-142; Peptidase C39 family | ali | 100 | 1 | RKIYIPQVDEMDCGVAALAMILKHYGSSASLAYLRNEAKTDLEGTTALGLVKTAENLGFETKAIQADMSLFEVADLPFPFIAHVLKNGELLHYYVVLGIKKDAIIIADPDPTVGIAKMTQSQFKSEWTGVALFIAPKPS | 139 |
| 2 | -32.000 | PF11814.8; G4T3E3_META2/170-375; Peptidase_C39 like family | ali follow.. | 16 | 1 | .VPFYRQTTDFSCGPSGLLMAMAGLKPDIELSQAHELQTSGHGGCGPHGLALAAWRRGFAVDDVRMHFDKITLEALTHIPLILISNRNKAPHWVVVTAHDPHFIYLH--DPDVDTVPVPKAEFLAMSR........... | 193 |
| 3 | -31.500 | PF12385.8; E1VLS9_9GAMM/65-219; Papain-like cysteine protease AvrRpt2 | ali follow.. | 13 | 10 | EFQVLAQPSSMACWATVFTMLKSWRQRGMTIEQATASVGRADTGLSGDDKVNFISTAGLVAEPPQS--GWETLLRNYGPIWVTTDEAAWAIHARIITGIYGDG-CFKIVDPAGGRYEESIAVFIPKYE........... | 155 |
| 4 | -31.400 | PF09778.9; I1LML3_SOYBN/55-263; Guanylylate cyclase | ali follow.. | 16 | 1 | .VPHINQIYTWDCGLACVLMVLKTIGVNNCDIQTLAELCCT-TSIWTVDLAYLLQRFAVAFSYFTVTFGAIQCRSISEEEISILILSGKTGHYVLICGYDAGADMFEIRDPASSKKRISSKSLEEARNTFLLLI..... | 209 |
| 5 | -29.200 | PF13529.6; A8AW79_STRGC/87-233; Peptidase_C39 like family | ali follow.. | 16 | 2 | EVPMQVQRAWNTCAPTTVSMMLACRGIDISQEQLAEEMGTDNQGTHNVNSIQVLNQHLFGYPEPTDGQAGYRLETVKYPLYYTFDNGRSGEHNVIGIGYELNS-GVYYIDPS........................... | 147 |
| 6 | -23.900 | PF05543.13; SSPP_STAA8/215-388; Staphopain peptidase C47 | ali follow.. | 12 | 14 | ..IRETQGNNGWCAGYTMSELLNATYNTNKYHAEAQGQRFQFTGLTPREMIYFGQTQGRSPQLLNRMTTYNEVDN-NKGIAVLGSRVESRNHAMAVVGNAKLD-VIIIWNPWDNGFMTQDAK................. | 153 |
| 7 | -17.800 | PF14399.6; D1A2G4_THECD/14-142; Butirosin biosynthesis protein H, N-terminal | ali follow.. | 16 | 1 | ...........HCETTALGVLLRHQGLDLSEPMLFGLGSLGGRVKPFELTKNLAARLGLELAVHETSSPRKAWENVARPVGLQLDSVHFAGHIVAMYGYDDRTAYLVDT.............................. | 129 |
| 8 | -16.400 | PF05023.14; B7FPQ4_PHATC/5-223; Phytochelatin synthase | ali follow.. | 10 | 41 | ...YSTQSEPAYCGISTLVIALNAFAIDPRLNCCLDLEEAKQKGVTLKAFSCLAVCQGIQASVYYTEEERVSENHFR--VVVSYTRQTGTGHFSPIAAFDSVSDSVLILDTARFKYGAHWVPLSLLYEAMQ........ | 204 |
| 9 | -7.980 | PF05412.12; RPOA_LDVC/381-487; Equine arterivirus Nsp2-type cysteine proteinase | ali follow.. | 14 | 10 | ............CGLHCISAMLNDIFGDSFTTRLGKCSRDSSEWLSDQDLYQLVMTANLPATIGHCP--------------AIYKLDCVNQHWTVTKRKGDRAVGRLAPDCLRG......................... | 98 |
| 10 | -7.120 | PF07091.11; KRM_FRACC/28-281; Ribosomal RNA methyltransferase (FmrO) | ali follow.. | 12 | 116 | ............CGLNPLAFGSMGLPAQTTY------LASDIDSQQMEFLDRALDLLEVEHRVEVVDLVSGAVPAQHADVTLLLERQRAGAGWELVDALRSPFVVVSFPTRSLGQRSKGMFQTYSAAFEAQA....... | 235 |
FFAS is supported by the NIH grant R01-GM087218-01
|
|
|
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7. |