Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: PF03435.18; Q94BZ0_ARATH/41-165; Saccharopine dehydrogenase NADP binding domain, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst VLVLGGTGRVGGSTATALSKLCPELKIVVGGRNREKGEAMVAKLGENSEFSQVDINDAKMLETSLRDVDLVVHAAGPFQQAPRCTVLEAAIKTKTAYLDVCDDTSYAFRAKSLEAEAIAANIPALLast
1 -64.800PF03435.18; Q94BZ0_ARATH/41-165; Saccharopine dehydrogenase NADP binding domain  ali  100  1VLVLGGTGRVGGSTATALSKLCPELKIVVGGRNREKGEAMVAKLGENSEFSQVDINDAKMLETSLRDVDLVVHAAGPFQQAPRCTVLEAAIKTKTAYLDVCDDTSYAFRAKSLEAEAIAANIPAL 125
2 -18.700PF13460.6; G2TRC2_BACCO/7-191; NAD(P)H-binding  ali follow..  19  1....GANGKIGKILVDLLQKSDRHIRAMV--RKEEQAQFFRQK---GVDAVLSDLEGTDELAEAAKGCDIVFTAGSG-DKTLAVKTMEAAEKAGISRF........................... 91
3 -18.600PF01073.19; O22813_ARATH/15-299; 3-beta hydroxysteroid dehydrogenase/isomerase family  ali follow..  20  1.VVTGGLGFVGAALCLELVRRGARQVRSFDLRHSSPWSDDLKN--SGVRCIQGDVTKKQDVDNALDGADCVLHLASEVNINGTCNVLEAAFKHEITRIVYVSTYNVV.................. 119
4 -18.200PF05368.13; NMR1_NEUCR/67-329; NmrA-like family  ali follow..  10  1IAVINAAGRQAASFIRVATAVGFHVRAQMRNLEGVVATEVSTNPN--VTVLQGELYTKETPAESDKGQCVDVTKNGPISGIGVNDALISELFRGAQFINTTFYGDEERIGMALADAAKKAGVQHY 125
5 -14.500PF01118.24; DHAS_YEAST/6-132; Semialdehyde dehydrogenase, NAD binding domain  ali follow..  15  2AGVLGATGSVGQRFILLLANHPHFELKVLGASSRSAGKKYVDAVTDLLPESATDIIVSECKSEFFKECDIVFSGLDA-----AGAIEKEFMEAGIAIVSNAKNYRREQDVPLIVPVVNPEHLDIV 127
6 -14.100PF01113.20; DAPB_VIBCH/2-125; Dihydrodipicolinate reductase, N-terminus  ali follow..  16  3IAIAGAAGRMGRNLVKATHQNPL----LGAGSERPESSLVGVDIGELCGIGKQGIVLVDNLEQAVEQFDVIIDFTAP---ASTLANLALCEQHGKKLV-IGTTGFTDAQRQTIEQAAKKIPIVM. 120
7 -13.300PF01488.20; HEM1_PSEAE/169-304; Shikimate / quinate 5-dehydrogenase  ali follow..  17  15ALLIGA-GETITLVARHLFEQGVK-RIVVANRTLERASLLAEQFGAHAVLL-------SEIPEELANSDIVISSTASQLPILGKGAVERALKQRKHMVDIAVPRDIEPEVGELDD.......... 124
8 -13.100PF00106.25; YOXD_BACSU/7-201; short chain dehydrogenase  ali follow..  28  3ALITGGGRGIGRATALALAK--EGVNIGLIGRTSANVEKVAEEVGVKAAFAAADVKDADQVNQAVAQVDILINNAG................................................. 86
9 -11.900PF01370.21; RMLB_NEIGO/9-257; NAD dependent epimerase/dehydratase family  ali follow..  17  1ILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDINPRYAFEQVDICDRAELDRVFARPDAVMHLAAESH-------VDRAIGSAGEFINIVGTFDLLEAARAYWQQMPSEKREA. 123
10 -11.500PF16363.5; A5G6F3_GEOUR/5-333; GDP-mannose 4,6 dehydratase  ali follow..  18  1.LITGITGQDGSYLAELLLKKGYEVHGL-NTGRINHIYQDPHESSARLFLHYGDLNDASSLNKVLRDVEEIYNLGAQSHVRVSFDVPEYTGE-----VDALGAVRILEAIRETELNTR....... 120
11 -11.400PF02571.14; K9PRS2_9CYAN/2-241; Precorrin-6x reductase CbiJ/CobK  ali follow..  25  2VLILGGTGDAAELAARVAAIEGVEAITSLAGR-------TREPSIPLGDFRIGGFGGVAGLANYLRRIDLLIDATHPFATQISCNAVDAASEVGVPRLML......................... 96
12 -10.000PF02670.16; DXR_PARUW/4-128; 1-deoxy-D-xylulose 5-phosphate reductoisomerase  ali follow..  19  1IAILGSTGSIGKNTLQVARHLKERIKVIAARENIDLLEAQSKEFCPDI-IAVFNNAKAYELQKRLPGKTVLAGMEG................................................. 77
13 -9.910PF16912.5; I7BJ28_NATSJ/144-370; Glucose dehydrogenase C-terminus  ali follow..  21  34ALVLGT-GSLGLLTAAMLTETLEYDRVYCLGRKDRPHPTIDIVDRLGATYIDSRETPVSEIPAAYEPMDLVYEATG................................................. 108
14 -9.820PF08659.10; M2UMU6_COCH5/2217-2396; KR domain  ali follow..  18  4.VISGGLGGLGREIMRWMVSRGAR-HFLVTSSRGVAGRADVIAFGVVVHAPASDISNRAVLEATLEDAS------------KTLPPIKGCIQAAMVLSD.......................... 95
15 -9.540PF04321.17; RMLD_SINFN/1-291; RmlD substrate binding domain  ali follow..  10  3LAVTGKNGQIALALKAQARPDVEILTLGRPNFDLACRSTVASSIRDAAPDIIVSLAAYTAVDKAESEPYEAVNRDGV------QALAEAAAGLGVPVIHLSTDYVF................... 104
16 -9.510PF02254.18; Q92CZ9_LISMO/5-120; TrkA-N domain  ali follow..  21  1FAVIG-LGRFGGSICRSLVEQ--GMEVLAIDSDEERVNEYMSIA---THAVIANSTDENALRQLIRNFEHVIVAIG................................................. 71
17 -9.480PF07993.12; Q9VLJ7_DROME/16-287; Male sterility protein  ali follow..  11  1..VTGGTGFLGKVIIEKLLRSTDVRRVYLLVRPKKILLKAKPEALKLVTPISGDCSSDGDRRMVTADVQVIIHSAASIRFVEPLQALNINTRATRLMIQLAKEMKGLEAFVHISTAFSNCPSQHI 148
18 -9.140PF01262.21; Q9S227_STRCO/141-353; Alanine dehydrogenase/PNT, C-terminal domain  ali follow..  16  31AVVIGG-GVSGWNAAQIAIGL--GFHVTLLDKDITKLREADKIFGTKIQTVV---SNAFELEKACLEADLVIGAVLIPGAKAPKLVTNELVSRGSVLVDIAGCFEDSHPTTHAEPTFPVHNSVFY 156
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.