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Query: PF03807.17; Q21544_CAEEL/2-98; NADP oxidoreductase coenzyme F420-dependent, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst KIGFIGAGKMAQALARGLINSGRITADNIIASSPKRDEVFLDQCKALGLNTTHDNAEVVQKSDVVFLAVKPVHVSKVASEIAPALSKEHLVVSIALGLast
1 -57.800PF03807.17; Q21544_CAEEL/2-98; NADP oxidoreductase coenzyme F420-dependent  ali  100  1KIGFIGAGKMAQALARGLINSGRITADNIIASSPKRDEVFLDQCKALGLNTTHDNAEVVQKSDVVFLAVKPVHVSKVASEIAPALSKEHLVVSIALG 97
2 -18.800PF01210.23; GPDA_COXBU/7-162; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus  ali follow..  15  1PIAILGAGSWGTALALVLARKGQ-DHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKG 105
3 -18.100PF10727.9; Q743Y6_MYCPA/8-128; Rossmann-like domain  ali follow..  20  6KVGIISAGRVGTALGVALERADH----VVVACSAISHASRQRAQRRLPDTPVATPPEVAAGAELLLLAVPDSELAGLVSGLAATVRAGTIVAHTSGA 100
4 -16.400PF10100.9; H6NF63_9BACL/6-429; Staphylopine dehydrogenase  ali follow..  19  2RVLILGTGPASVQLAVTLKNKWNCC--GIAGRESVRSEPFFTALDESGRHVFQGYGTITGEWDTLILAVTTDAYVAVLKQIHGELLKRVRCMLLLSP 118
5 -16.200PF07991.12; ILVC_METAC/15-178; Acetohydroxy acid isomeroreductase, NADPH-binding domain  ali follow..  18  5TIAIMGYGSQGHAHARNLHESGL----NVVVGLRKGSSSWAKAES--DGLKVMTVEEAAKAADVIMILLPDEKQASVYYSQIEPSLEAGNALVFAHG 95
6 -12.500PF02558.16; Q9K9R6_BACHD/6-154; Ketopantoate reductase PanE/ApbA  ali follow..  14  1.VAVIGSGSIGLLLYAYLKLANHLNKEGLTFVAKSGEHQPIS------VTATPLSSFSAEEAEVGFITVKSFAVKALLPQLQRK--KWDGLVFFQNG 102
7 -11.900PF03446.15; Q8FTI1_COREF/15-184; NAD binding domain of 6-phosphogluconate dehydrogenase  ali follow..  15  1QIGVVGLAVMGSNLARNFARNGH----TVAVYNRSTDKTDKLISTDGNFIPTKTVEDFVAALEAIVMVQAGAATDAVINQLADAMEEGDIIID.... 96
8 -11.600PF02056.16; CHBF_ECOLI/6-188; Family 4 glycosyl hydrolase  ali follow..  20  1KVVTIGGGSSPELLEGFIKRYHELPVSELWLVDVEGGKPKLDIIFDLKLYKTLDRREALKDADFVTTQLR........................... 84
9 -10.400PF00670.21; SAHH_DICDI/191-351; S-adenosyl-L-homocysteine hydrolase, NAD binding domain  ali follow..  11  25VAVVAGYGDVGKGCAQSLSKMGA----RVLVTEIDPINALQACMDGYQI---VTMETAAPLSNIFVTTTGCRDI--VRGEHFAVMKEDAIVCNIGHF 112
10 -10.100PF00056.23; MDH_CHLAA/3-142; lactate/malate dehydrogenase, NAD binding domain  ali follow..  20  2KISIIGAGFVGSTTAHWLAAKELGDIVLLDFVEGVPQGKALDLYEASVRVTGTNNYADTANSDVIVVTSNADITRACISQAAPLSPNAVIIM..... 115
11 -9.830PF03721.14; UGDH_CAEEL/10-205; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain  ali follow..  20  2KVVCVGAGYVGGPTCAMIAHKCEWNSDKLPIYEPGLDEIVFAARGR-NLFFSSDIPKAIAEADLIFISVNTKYVESVSRTIAQYAGGPKIVV..... 123
12 -9.830PF02423.15; Q2YIG4_BRUA2/15-320; Ornithine cyclodeaminase/mu-crystallin family  ali follow..  124TMAIIGNGAQSEFQALAFKAILGVDKLRLYDLDPQATAKCIRNLQGAGIVACKSVEEAVEGADIITTVTADKANATILT--DNMVGAGVHINAVGG. 219
13 -9.650PF01118.24; DHAS_YEAST/6-132; Semialdehyde dehydrogenase, NAD binding domain  ali follow..  20  2.AGVLGAGSVGQRFILLLANHPHFELKVLGASSRSAGKKYVDAVNWKDIIVSECKSEFFKECDIVFSGLDADYAGAIEKEF---MEAGIAIVSNAK. 104
14 -9.510PF01488.20; HEM1_PSEAE/169-304; Shikimate / quinate 5-dehydrogenase  ali follow..  19  14QALLIGAGETITLVARHLFEQGV---KRIVVANRTLERASLLAEQFGAHAVLLSEPEELANSDIVISSTASQLPILGKGAVERALKQRKFMVDIAV. 111
15 -9.100PF13727.6; C3MA20_SINFN/126-306; CoA-binding domain  ali follow..  13  84RAVIVGGGTPARDLIRTIEHQPANDIRICGIFDDRDERRSPHVIAGYPKLGTVDELVEFARIDMLIFSL-PLTAEKRILELLRKLWVLPVDIRLAA. 181

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24