FFAS03 results for PF03866

Query: PF03866.13; HAPP_PHYPO/1-164; Hydrophobic abundant protein (HAP), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160`
#	Score	Template	Links and tools	%id	First	`MMKYVFVALCLFAVVALATEVEQKESNTRVARLNVGGLVGCVVALVANIVGGLLRVIIGLVVTLSGVLQIVVGTVLGLVATVASLALDVVGSTVGGILNSLLGLGAILSLVEEVLHVLLSQALLTGLVNAIFALPLSLLVALSTLTDALASAACDCGASATGAG`	Last
1	-109.000	`PF03866.13; HAPP_PHYPO/1-164; Hydrophobic abundant protein (HAP)`	`ali`	100	1	`MMKYVFVALCLFAVVALATEVEQKESNTRVARLNVGGLVGCVVALVANIVGGLLRVIIGLVVTLSGVLQIVVGTVLGLVATVASLALDVVGSTVGGILNSLLGLGAILSLVEEVLHVLLSQALLTGLVNAIFALPLSLLVALSTLTDALASAACDCGASATGAG`	164
2	-7.750	`PF10278.9; A7RLX2_NEMVE/18-205; Mediator of RNA pol II transcription subunit 19`	`ali follow..`	16	5	`....................................................LLRNEPPTPTDINGSSNLL--VQNGLEQSYQKFCGKKVKENLSAFLPHLPGYIDEKGTPENSLRSVIDKPPIGG--KELLPLPSHALSGFRLNPGPIPEQ............`	100
3	-7.550	`PF07694.12; Q9KU35_VIBCH/25-193; 5TMR of 5TMR-LYT`	`ali follow..`	19	17	`.....ISVYVLFSLFCIGLQINDAIANTRAIGAVMGGLFGPVIGFAVGLTGGLHRYTLGGFTDLACAISTTAEGLIGGLLHTYLLRKGKGKLLFSPSIVFAVTLFAEIVQMLIILVVAKPFEQSYALVSTI-AAPMIIANSVGAA...................`	161
4	-6.810	`PF11166.8; Q2FYD6_STAA8/2-99; Protein of unknown function (DUF2951 topsan)`	`ali follow..`	24	58	`...................DEKNKEKNAKNIRDIKMWILGLIGTILSTFVIALLKTIFGI........................................................................................................`	98
5	-6.720	`PF16496.5; K7IWW8_NASVI/6-444; SWIRM-associated domain at the N-terminal`	`ali follow..`	11	28	`................MLKNAKKYIQTDPPTNKSLSTLVVQILQFQEDSLG-MTRIPMKCFLDFKGGLCQILLTAFRFKQEQGWRRFDFPVGK------SGPRTDRMIEMLVAIERALIQSRCLT-CVFVRSDVDKPTAVKVKEVVRRHQGTIAESEDDAT...`	175
6	-6.440	`PF00324.21; S12A3_MOUSE/139-644; Amino acid permease`	`ali follow..`	17	1	`.......................................GVMIRCMLNIWGVILYLRLPWITAQAGIVLILLSVMVTSITGLSISAISTNGKVKSGLISRSLGLGGSIGLIFAFANAVGVAMHTVGFAETV.................................`	102
7	-6.380	`PF10164.9; H3AX96_LATCH/28-133; Uncharacterized conserved protein (DUF2367 topsan)`	`ali follow..`	35	66	`...................................................................................................................GVLEDDFTCLGILCAIVFFPIGILFCL-----ALRQRRCNCGAT.....`	105
8	-6.380	`PF15576.6; L9KL33_TUPCH/16-260; Domain of unknown function (DUF4661 topsan)`	`ali follow..`	33	167	`..................................................................LLELLASALLALCSRPLRAALDALGHGLLSFLAALHGLHAVLSLLTA---HPLHFACLFGLLQAL-VLAVSL..........................`	243
9	-6.080	`PF05838.12; S5YCL9_PARAH/8-97; Glycosyl hydrolase 108`	`ali follow..`	15	1	`.......................................................................ATEIVAREGGFVNDPNDPGGATKYGVSLATMRRLGLDLTRDGKIDVADVKALSAAQAQAIFIEHYFRKPGLGELPETLWASVFDMYVNS....`	89
10	-6.060	`PF05297.11; LMP1_EBVB9/1-386; Herpesvirus latent membrane protein 1 (LMP1)`	`ali follow..`	24	21	`............................................LSSSLGLALLLLLLALLFWLYIVMSDWTGGALLVLYSFALMLIIIILIIFIFRRDLLCPLGALCILLLMITLLLIAQALFLGIVLFIFGCLLVLGIWIYLL...................`	127

FFAS is supported by the NIH grant R01-GM087218-01

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