current user: public
If you have questions about the server, please let us know.

Query: PF03992.16; HMOB_BACSU/65-140; Antibiotic biosynthesis monooxygenase, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .
# Score Template Links and tools%idFirst GFAVLNNIAVTQEGRPLFENRFKNRAGKVENEPGFEAIRVLRPLDSDTYVILTLWETESAFQDWQQSGSYKEAHKKLast
1 -48.900PF03992.16; HMOB_BACSU/65-140; Antibiotic biosynthesis monooxygenase  ali  100  1GFAVLNNIAVTQEGRPLFENRFKNRAGKVENEPGFEAIRVLRPLDSDTYVILTLWETESAFQDWQQSGSYKEAHKK 76
2 -21.700PF07682.11; F4B4D5_ACIHW/1-294; Sulphur oxygenase reductase  ali follow..  10  151.VVAFAEHSVIPGKEKQFEDAIVRTLEMLKKAPGFLGAMVLKEIGVSGFGAKGFHQVLENPGSLEPDPNNVMYSV. 229
3 -16.300PF08803.11; Q7CGF9_YERPE/4-99; Putative mono-oxygenase ydhR  ali follow..  12  1..ILQVDFPYTGPWGNEMTKAMEGLARSIAEEPGLIWKIWTVNETTNEAGGIYLFSDISAAKAYLAM......... 65
4 -14.500PF11695.8; Q9A5F4_CAUVC/31-168; Domain of unknown function (DUF3291 topsan)  ali follow..  13  6..VGRLKAPIDHPMIKDFADNLDRINALAEASPGFVATDLAIDSDPLFIPNLSVWSDIPSLGAFVYRSGHVEIMRR 88
5 -14.300PF13826.6; G7XTL7_ASPKW/119-243; Domain of unknown function (DUF4188 topsan)  ali follow..  10  7GARNHHPLGMFAPGMKELGDSAEKMQRDMRANPGLLGSSQWLKCDSNEFMTVFYLRDYAALHQFAHDEIHMEGVR. 87
6 -14.000PF16157.5; H2J0N4_RAHAC/1-172; Domain of unknown function (DUF4865 topsan)  ali follow..  12  2.IAMQYSFTLPADDMGIIEKRIADNGYRTDGFAGLIFKTYLYSRRDNIYAPFYLWQDVSGMNRFISGAGFQGVANA 85
7 -12.200PF11639.8; Q2S9J0_HAHCH/1-104; REDY-like protein HapK  ali follow..  14  2.ETIIHKIRLFDVQADAFEFWVQNVYATCPDLPSVVRFDVHRASLQANYVEVIKITDRAAFDADMETSTFAGLVQA 82
8 -11.000PF05977.13; Q92SW7_RHIME/14-535; Transmembrane secretion effector  ali follow..  16  425.IVVMIDYEIADEDIPEFLKTMAER-RRIRIRDGAGHWALMRDLENPETYHVPTWVE................... 483
9 -10.300PF16291.5; Q65N75_BACLD/114-202; Domain of unknown function (DUF4937 topsan  ali follow..  14  1..LKLIRCKSAEQKLQAFSEA-QAKWAPLQNVSGFIRQ---ETEDGPEAVVLALWKSKHDYLNFMAEHH....... 68
10 -9.660PF07045.11; Q47EX6_DECAR/3-96; Domain of unknown function (DUF1330 topsan)  ali follow..  12  4...VIGHITVKD--AAKWDEYRSQVPATLAPWQA--KLAVFGGEHKHTDTVVIRFPDTEAANGWFNSPAYQALIP. 78
11 -9.030PF07978.13; Q7VX89_BORPE/3-102; NIPSNAP  ali follow..  6  3....ERDYRIKPGKAGLFVATYEAHGLALQKKYLGRFLGYFMSEIGELNHVVAWWERDAARSRMLADPQWQAYLER 80
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 8 7 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24