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Query: PF03999.12; B0WUV8_CULQU/23-592; Microtubule associated protein (MAP65/ASE1 family), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst DHMSRLPEHIQTFFDEVYEESENRKTKILQTIDGLRREAANLRRLLKEDTVDGVDEQPGMPLHLVQITLDRSLEKMREKLKHRHELIEEYLFEQETLCEELGEDLRNLPKDPLPSEATMCEFRTYLDNLRAEKLQRFDDIATMRRDIKIMMNHLGIVPQTEREQDLTEALNFPPTRVNLHDLRCLHEQVGAWYDDLKENIDRARAKLANLWNVLAVSPSHVKRYEKYNEYTQATYDKLFAELDRCETLRRENIQNFIEQTRVEIVQWWDKCLKSNEERSRFSTFKSEVYNEDLLTLHEMELNDLKDFYRTNETIFALVEQRREMWDKMILLEQKSSDPSRYNNRGGKLLEEEKERKRISIQLPKIETRLLEACKRYEEENKRKFTVFGESIEEIIQEQWKKREEGKLMVSSARKKANMATPTAANRTAALTRTPRTAETMLKHTSIASRTKLTVAASESMKHSASKQLSTAGLKRKMPSPKAGVVKRSLLKDLNSPRAFAKPNAPPSASKNRLMPPKSPAGKIPTIKVYDTKNGTKRRSRRKSQNKHRRSTSRPVPEIHVTSSSNSTIQSLast
1 -85.600PF03999.12; B0WUV8_CULQU/23-592; Microtubule associated protein (MAP65/ASE1 family)  ali  100  1DHMSRLPEHIQTFFDEVYEESENRKTKILQTIDGLRREAANLRRLLKEDTVDGVDEQPGMPLHLVQITLDRSLEKMREKLKHRHELIEEYLFEQETLCEELGEDLRNLPKDPLPSEATMCEFRTYLDNLRAEKLQRFDDIATMRRDIKIMMNHLGIVPQTEREQDLTEALNFPPTRVNLHDLRCLHEQVGAWYDDLKENIDRARAKLANLWNVLAVSPSHVKRYEKYNEYTQATYDKLFAELDRCETLRRENIQNFIEQTRVEIVQWWDKCLKSNEERSRFSTFKSEVYNEDLLTLHEMELNDLKDFYRTNETIFALVEQRREMWDKMILLEQKSSDPSRYNNRGGKLLEEEKERKRISIQLPKIETRLLEACKRYEEENKRKFTVFGESIEEIIQEQWKKREEGKLMVSSARKKANMATPTAANRTAALTRTPRTAETMLKHTSIASRTKLTVAASESMKHSASKQLSTAGLKRKMPSPKAGVVKRSLLKDLNSPRAFAKPNAPPSASKNRLMPPKSPAGKIPTIKVYDTKNGTKRRSRRKSQNKHRRSTSRPVPEIHVTSSSNSTIQS 570
2 -12.200PF08580.10; V5HV84_BYSSN/491-1186; Yeast cortical protein KAR9  ali follow..  11  35RALNGAAQQIQTWIGKALDAEDDVE---REGLDDVDRAITKFEGLVNV-------------YVTAIEDVQLR-DDIRTINGDVLKTIVVQMETILQNWSRIRTHLKGVKEQVELAMEWEELWGVVLGDVGLEVEDLGRVIFELEEDISELETIIEETPPTNSTPNKRFSMPQTYSTPSQQPVPRSTGPDDSALLGLFARLQPLRASLDFLPMRLSM-PTACQDLEMKREKLENAYKKLESDAEVLRELDEDRWVLVFRNAGRQARTMCESVERSIGKLQEALDTGAQFNNHATLAKRIESFEAKKIHYPAIERVLSIIEK-----------------KDRITVNGEILRLLHEMRSR---------DALNASIKVMDGLLDDIDFSKTQQLRDSISSIITMDSPATGSVVDTPGSSPASSVVLSNGNGRKGSSTPNVGSSSRRGSSVASTNRKRYSGIPQGAATLSAGRRSSIPRASFSGSLTSPTRSQTNPSFTPRPASRTSTAPTKTPDNRPRWNSSTNTNDLNIGHTHKTLSATTPSRNPNRNSRSNIPTPSPLSREASRSPVPPHM 605
3 -11.200PF11018.8; Q2M131_DROPS/41-220; Pupal cuticle protein C1  ali follow..  7......................................................................................................................................................................................................................................................................................................................................................................................................................TTQQNVVRSFGGTVSTYSKNVVTPYSSVSKVDSRITNNVYTPKTLYSAPAPVITKSIYAAAPAPVYAKTVYSAPAPVLTKTVYSAPAPVLAKTVYSAPAPVLAKTVYSAPAPVYAPAPVVTKAVYAAPAPVYAAPAPVYAKTYAAAAPTAFVKYSPAAVVSHAS 170
4 -10.500PF06160.12; R7G8R1_9FIRM/22-573; Septation ring formation regulator, EzrA  ali follow..  11  192DQQKEIKESITR-LNEIVEALPSLYERAKGILPRAIDEVGYNYARAKNKGVLLEHLEVSKNLDVISDMLKNDLNRLHSTPENVKEDLDDLEVRIAQLAEQIRLE-----------EEAFDEVNDGLTALFDSIREVNCEFDDIKSLYARVYERFGFE--NWTQRLQDTQTRLDVLNDMQRRLDKIVLDKQVPYTTILIAYKELAQSNAGFSKEVELMKEKLNNACSDEERAKKQLIKLQLIINEIRVMLKHRLPNVSAQYEKDLCKGEDMM----------------HDVRDILEHSPLDVTQLNAKLREIDFIYTLYNNVNNLVGMAIMVENTIVFGNRYRSSCPEIDSETKALKIGIQCIEKMHPGAYEKLVN................................................................................................................................................................................................... 552
5 -10.400PF11235.8; H3B103_LATCH/224-387; Mediator complex subunit 25 synapsin 1  ali follow..  4.........................................................................................................................................................................................................................................................................................................................................................................................................................ATSATQSKQVVPQAPPTVQSQTSLLSTPSQPSQLPPGSAQQVAPPGSLSAAQAAAKMAVEAANSQKPGLATRFFSSAVPNLSQHPNTSGVGPPFSQPPVPTMTPGPISKMPPSTASLIPMTSQASLLPQQQQSQQPSQPSQQPLQPGGVPPGPVNVPQPGA 164
6 -10.300PF09595.10; VGLG_HMPVC/35-217; Metaviral_G glycoprotein  ali follow..  1..........................................................................................................................................................................................................................................................................................................................................................................................................LIGITTLSIALNIYLIINYTIQKTSSESEHHTSSPPTESNKEASTISTDNPDINPNSQHPTQQSTENPTLNPAASVSPSETEPASTPDTTNRLSSVDRSTAQPSESRTKTKPTVHTRNNPSTASSTQSPPRATTKAIRRATTFRMSSTGKRPTTTSVQSDSSTTTQNHEETGSANP 176
7 -10.100PF10168.9; I3KZS6_ORENI/8-718; Nuclear pore component  ali follow..  11  531ECLELLSRATQVFREEYILKQDMAREEMQRRVKLLTGQKNKQLEELS-------------LCREERKSLREAAERLADKYEDAKYRQETIMNRVKKVLCSLQSQLPILSNSEKEMKKELQTINDQLKHLDNCIRQVNMKMEYQKTQVDKDMPG--------------TRARVSLNAPQKKVVQDVLKEQGQQIGDMMKQIKDIKNHFS.......................................................................................................................................................................................................................................................................................................................................................................... 711
8 -10.000PF04108.12; S8BG25_DACHA/15-418; Autophagy protein Apg17  ali follow..  20..............NEIITSTRNALIDASIMASRASFLQNGIKDELKL-------------LQHANTLMENQRETARKGFQTSLGDLDEANHRLDEILSLLRATEVEEA----VDEDGIENLRSRLRGIIDQVQETDENFESHLEPFTQLIAFITESLGALSKKSAPA------IPNPVVAITPSLQSMEDHASVMASLLESLARHYDLCSMALKRAESHDSGVSSQEGDLQTEED--KADMLAVLQRDAGEVDDVVTEIKERLDEMETTSVLVEQTVAHIGDHYRT----SLLSKMHEGQSSLVNCTIQSKEFVQKQMD-GVIAERLDELQRLTDHYVLFGEAYDALLVEVGRRIAVQRQKDSIIQEALAKIDMLDLNEREQFR......................................................................................................................................................................................... 385
9 -10.000PF15058.6; SPERI_MOUSE/1-262; Speriolin N terminus  ali follow..  1..........................................................................................................................................................................................................................................................................................................................MSLLTSYEGLRHQ---IERLVRENEELKKL--RLIREN--------------QELKSAIKTQAGGLCISGFTGGLGEAAAGPPQHQGVFLPPASAAAKEPCSEDLGMVALAPLADMLNTPQLSPAAGSLVNPLAATLNPLLSGQIPLLQNNQFANLVPCSMSNQLTNPTTVSPGVTLASSLGLPSTGPLNSQMTSPMTVPPGTTLASSLGLTSTGSLTTSSRLVGPLAVSQSSPIMAPLAGTVAVSLSSPLLSSTA 238
10 -9.840PF05937.11; APC_HUMAN/2670-2843; EB-1 Binding Domain  ali follow..  1..................................................................................................................................................................................................................................................................................................................................................................................................................RSGRSPTGNTPPVIDSVSEKANPNIKDSKDNQAKQNVGNGSVPMRTVGLENRLNSFIQVDAPDQKGTEIKPGQNNPVPVSETNESSIVERTPFSSSSSSKHSSPSGTVAARVTPFNYNPSPRKSSADSTSARPSQIPTPVNNNTKKRDSKTDSTESSGTQSPKRHSGS 168
11 -9.730PF15822.5; A0A2I2Y506_GORGO/5-242; MAPK-interacting and spindle-stabilising protein-like  ali follow..  2............................................................................................................................................................................................................................................................................................................................................................................................................................SLADALPEHSPAKTSAVSNTKPGQPPQGWPGSNPWNNPSAPSSVPSGLPPSATPSTVPFGPAPTGMYPSVPPTGPPPGPPAPFPPSGPSCPPPGGPYPAPTVPGPGPTGPYPTPNMPFPELPRPYGAPTDPAAAGPLGPWGSMSSGPWAPGMGGQYPT 159
12 -9.650PF05349.12; H0ZJB4_TAEGU/37-208; GATA-type transcription activator, N-terminal  ali follow..  3.....................................................................................................................................................................................................................................................................................................................................................................................................................QTLAISAAQGPTPYDGSPGGFMHSTPSSPVYVPTTRVGSMLPTLPYLQGSGAAQPSHPGGGHAVWSQPAAESPSYSSGGGSHPSGRFPYSPSPPVANGASREPGAYSNSLGARDQYSPLARPLNGSYPGPYTSYVGPQLAPAWPTAPFENSMLHCLQGRAAPIPV 167
13 -9.630PF00997.18; E2QXF8_CANLF/23-184; Kappa casein  ali follow..  1.....................................................................................................................................................................................................................................................................................................................................................................................................................EVQNQEQPTCRENDERLFNQKTVKYIPIHYVLNSFSHYEPNYYPHRPAEPINHQYVPYPFYAKPAVAVRTHAQIPQWQVLPNAYPPTMMHRPQLHPSFIAIPPKKIQDKTSIPTINTIATAEATPIPLTEPKVNTAVTSDASSEFTITSTPETTTVPVTSP.... 161
14 -9.530PF12128.8; Q8EAA0_SHEON/8-1195; Protein of unknown function (DUF3584 topsan)  ali follow..  409KQREVARGDLDALEAQWRSQMDAGKASFSEQEYQFKLNAAELKLRVDGVTYTEEEKLNLAIFDERIHRADEEQESCNAKVERLTSDERKLRAKRDQANEALRI-----------ASLRVNERQTALDELHHMLFPQSHTLLEFLRK--ELLHRTDLHPS--VTGESDTVFGVNLDLKAIQELRIRLSKAEEALQSAQELQAEAESQLVAINGELDKLSRELTFARTAYKNSRDDLRRLFDEKRSEQDKINKALAERKAFAQQRLTQLDGELKQLKHQHQLWLEEQKEQALEEVIGALDNQLGQIKATIDARRESAK--AEQKACETWYKNLKSRGVDEDNILK--------KQQIRELETKISRAEQR-RSEVLRFDDWYQHTWLIRKPKLQTQLSDVKRAASEIDQQLKAKTQEVKTRRQQLETERKASDAA......................................................................................................................................... 851
15 -9.530PF06121.14; I3N7Y4_ICTTR/15-202; Domain of Unknown Function (DUF959 topsan)  ali follow..  22...................................................................................................................................................................................................................................................................................................................................................................................................................TDLADSRDTLVSQPQGSLPVQPAAAPATHVAPQDDPAEQRTAPASPRPPLENPKAAPSRAPGAPISAAASAAPAASPDTREENVAGVGAKILSIAQGIQSIVQLWNEATPTQSSAGSASAPTDPLTLAGPSGPPEESGTTLGPHRGAPGSLGTWTAESGTLAVPTQS 188
16 -9.510PF15921.5; G5BJQ7_HETGA/1-1111; Coiled-coil domain-containing protein 158  ali follow..  10  462EKVSSLTAQLEST-KEMLRKVVEELTAKKMTLENSERTVSDLTASLQEKE-------------RAIEATNSEITKLRSRVDLKLQELQHLKTEEEHL-QHAQTECEALRLQMAGKDKVIEILRQQIENMMQLVGQHGRTAGAILVEKAQLEKEINLELQEFKVLKDKKDAKIRELEAKVSDLELEKVKLVNAGSERLRAVRDIKQERDQLLNEVKNSRSELNNLSED-----------YEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGADGH---QKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEQELSTVATEKNKMAGELEVLRSQER---RLKEKVANMEVALDKASLQFAE................................................................................................................................................................................................ 823
17 -9.220PF04163.12; KAR5_SCHPO/1-544; Tht1-like nuclear fusion protein  ali follow..  43SEGLAGFDSLAHVYQALLKKSQEVAATLISKCSLLNTELTIDNRAIQMTLCDFERSQILAPSECVRGSQSECVSKLESTST---LSFTSHFHDVNHLCRLA-----NLEMQKELSIEVNMNVTLVQKQFLEMVILHLRNFESVTDKMNQRIDKFDGKFNSVIENSFKDIN------FRVNQEIMGLVELQNHQQEGMVQQKEILSTIKQLKSEI-----------------FDINSFFANFIEESAGYSNSLIEKLNEKFTSENAIALSAIGKYTSEFSAFMEKRIKNLITTTEDSLQQSVQSNIDFVNSGFQPLYDLTI--QLKEELQSLKRLSSEQQNLQHE--QILQWKSDFLNVSKDHLKVLQQLRPLIDIVEK................................................................................................................................................................................................ 393
18 -9.150PF16072.5; B4LSP3_DROVI/260-545; Domain of unknown function (DUF4813 topsan)  ali follow..  117...............................................................................................................................................................................................................................................................................................................................................................................................................................SGGYGGGGGGGSNGGGEDKIIIINNGPPGSVTTTDAGSGTTVINAGGAQPAAPAAPAYQPAPAGAPAAAPAAAPAPVPSAPQTPLAPLTPSAAEGAIAATAAGAGLANAAAPAAAAPPPVDPNAPAAAAAPPAPGGIICVPVRVPEPDPKDPTKT 271
19 -9.130PF15895.5; CXX1_HUMAN/1-209; CAAX box cerebral protein 1  ali follow..  49............................................................................................................................................................................................................................................................................................................................................................................................................................RCPLRSCSLPRSACLCSRNSAPGSCCRPWASLWSEPPPSPSSQPAPPMYIWTLSCAPAASWAPVTHWTDHPLPPLPSPLLPTRLPDDYIILPTDLRCHSHRHPSHPTDRLLLLVIWTHLGGIWAGHSPWTVIQTAGRPPRDLSPSARPISSPPPETSC 206
20 -9.080PF08549.10; E3Q6J3_COLGM/3-717; Fungal domain of unknown function (DUF1750 topsan)  ali follow..  272........................................................................................................................................................................................................................................DHLTPRDISFARYQQ-NHEWMEEIVSSLKGELASLTDGIFLEPGLADEF-----RKRVREHLDATKAEMEKMKAEHAKN---LASLKASSVFVDAEKDIKNSVQEHGP-DSEDNSGPWSQKHNKKVDEIVAQVEANLGRQIEVLHNVHRIQ------------EPAPEPVKEPSPVPPPASSLPPAAGADTGALGSRRPSQAGSTHSGVMVGDSDIDMGGTAAGLLDEMHTGFSANSTPLNNFPTPQTHMSALNSTAGTPANANAPSPAPVPPTIPEETETQASAGASAGAAEDVTMGNTGSTKNTPATAPDHGTGSGEWVVVPKGGTSPDPGAGAAT 636
21 -9.050PF03035.14; Q917X0_9CALI/1-251; Calicivirus putative RNA polymerase/capsid protein  ali follow..  30....................................................................................................................................................................................................................................................................................................................................................................................NQRAEFDFNRQLQQNSFNHDKEMLSAQIQATKQLQADMIAIKQGVLAAGGFSPTDAARGAVNAPMTQALDWSGTRYWAPGSMKTTSYSGKFVSMNPVRQVEFPQPKKSAAIPSSASSVSSGRTNLTNSTQSTVVSTSSAPPSRGSSAPSTLSRATTRTSNWVEEQNRNLEPYMRGALQTTFVTPPSSRASSNGTVSTV 227

FFAS is supported by the NIH grant R01-GM087218-01
1 4 5 9 0 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.