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Query: PF04033.12; O30319_ARCFU/41-138; Domain of unknown function (DUF365 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKFVFYQSHEDTGFVGEARIKRVVLSENPMQFFETFGDRVFLTKDELKEYMKSQERWGRRRESKKKKLWMAIELEDVKKYDKPIKPKRLVPVGGQYLRLast
1 -66.800PF04033.12; O30319_ARCFU/41-138; Domain of unknown function (DUF365 topsan)  ali  100  1MKFVFYQSHEDTGFVGEARIKRVVLSENPMQFFETFGDRVFLTKDELKEYMKSQERWGRRRESKKKKLWMAIELEDVKKYDKPIKPKRLVPVGGQYLR 98
2 -7.340PF02870.15; OGT_MYCLE/1-71; 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain  ali follow..  6  1MIHCRSMDSPIGPLILAGHGSVLQTYEPSRVGWLPENGAFAEAVSQLDAYFAGELTEFAIELD................................... 70
3 -6.700PF11639.8; Q2S9J0_HAHCH/1-104; REDY-like protein HapK  ali follow..  7  3..............................TIIHKIRLFDVAQADAFEFWVQNVDYATCPDLPSVVRFDEVIKITDRAAFDADMETSTFAGLVQAFSR 85
4 -6.440PF11047.8; SOPD2_SALTY/1-319; Salmonella outer protein D  ali follow..  15  1MPVTLSFGNRHNYEINHSRLARLMSPDKEEGVWDRFKDCFRTHKKQLYTLIHGCERENQAELNVDITGMEKIHFTQLKEYANPSQQDRF......... 99
5 -6.340PF09448.10; C5BCG5_EDWI9/1-234; Methylmuconolactone methyl-isomerase  ali follow..  5  3..............................TRMGIVSRRQDLSHEQFLHHWREVHAPIVCAMTGIRRYQQ............................ 42
6 -6.280PF11870.8; A1TXK1_MARHV/389-476; Domain of unknown function (DUF3390 topsan)  ali follow..  7  31WRFWASLNTSPVFYRLFLWGATRFGKLAPKNVWTENHSAPVPARRSLHDLAKAHLN.......................................... 88
7 -5.980PF13156.6; D7GIA2_PROFC/36-164; Restriction endonuclease  ali follow..  6  12.EVCTWPEWTHNEHTHDSGIDLVARNREDGTWTKFYDPKHYLQKGDIDSFFTASGKSWD....................................... 73
8 -5.900PF00910.22; A7M6L1_9SECO/473-576; RNA helicase  ali follow..  5  1..VYAYGESRTGKTLVVDKLDTVYSRNPIDQYWSGYRRQPIVSIDDFGAVTCDPSMEAQM-IPLVSSAPLPLTMAAIEEKGMMFDSKFIFCSSN.... 103
9 -5.780PF03229.13; Q9IZ54_CHV1/1-129; Alphavirus glycoprotein J  ali follow..  6  1MRSLLF-------VVGAWVLAAVTDLTPKAALATGANATAGVANATATAGVANATDAEATSPGAAATSAAVVTPPPTDSTQTAETP............ 79
10 -5.750PF08987.10; A7TRB3_VANPO/3-113; Protein of unknown function (DUF1892 topsan)  ali follow..  7  30TEEPKESKKMHEFVDELVLPFQVDEIDSLNDWFDKFDEEICIPNEGHIKYEITSDGIIVLILDKEIE............................... 96
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Godzik A. Improving the quality of twilight-zone alignments. Protein Sci. 2000 Aug;9(8):1487-96.