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Query: PF04629.14; U3K6F4_FICAL/263-517; Islet cell autoantigen ICA69, C-terminal domain, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst PYEFTMLKSLQDPVNKLTEKVEREDQQIESTNTVEDQQSQLISLDEESHTKESNYSADDGKDVISTLQGHCHHEQNSGAIDALLDLQPEENASKEKFVRSSEPEPGDKDDMVLLNEILNASSLDEGEFSKEWTAVFGQAADLTMNSSARDGESTSSSAVPAPSGYLPSQLLDQNMNDLQSSLHGWAASSVSPPSIPQPAQKPHSLNVNDGKTPGKESTKNPKDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNALast
1 -103.000PF04629.14; U3K6F4_FICAL/263-517; Islet cell autoantigen ICA69, C-terminal domain  ali  100  1PYEFTMLKSLQDPVNKLTEKVEREDQQIESTNTVEDQQSQLISLDEESHTKESNYSADDGKDVISTLQGHCHHEQNSGAIDALLDLQPEENASKEKFVRSSEPEPGDKDDMVLLNEILNASSLDEGEFSKEWTAVFGQAADLTMNSSARDGESTSSSAVPAPSGYLPSQLLDQNMNDLQSSLHGWAASSVSPPSIPQPAQKPHSLNVNDGKTPGKESTKNPKDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA 255
2 -8.860PF05493.13; C6T343_SOYBN/2-68; ATP synthase subunit H  ali follow..  35  49..................................................................................................................................................................................................................................WAIVYAQMKPLIVP............... 63
3 -8.270PF10484.9; W5KX85_ASTMX/2-134; Mitochondrial ribosomal protein S23  ali follow..  19  25...........................................................................................................................................................................................................................KESQKPLWFDVYTAFPPKREP............... 45
4 -8.220PF03242.13; M0RT91_MUSAM/1-90; Late embryogenesis abundant protein  ali follow..  12  29................................................................................................................................................................................................AAAAAAVGRPAEKKTVVRKVVDSSTAAASGSSNSWIP-----DPVTGPANFRVQDAAE..... 84
5 -8.000PF04931.13; K2SXE2_MACPH/89-879; DNA polymerase phi  ali follow..  10  624.....MIDILSKKESMSGQQDLFDQQGSEDGEDASEDDEDEQDSDVEMVEADGSDVEEVEEASDVDEEEEEDEDEEGGEDGSDADDEELEKFNAALAKTLNTSMLTGEGEDSDDDDEADMDDDQMMALEPHLTKIFKQRQEAANKSKKKDNKDAKATMINFKNRVL--DLLL................................................................................... 788
6 -7.540PF17286.2; Q6FX40_CANGA/484-845; PRMT5 oligomerisation domain  ali follow..  16  85..................................................................................................................................................................IGYFSAVLYDVILSIVPEGTIVRVPQSKNNHEGEALHSTPDKSAHTNDNKYYFKKIDKTPGLTSWSPMI----PLSQPLLVSDDTE....... 168
7 -7.020PF17355.2; D5DXM1_BACMQ/39-160; Family of unknown function (DUF5383 topsan)  ali follow..  28  74..........................................................................................................................................................................................................SSKNTSYKKERTEQTVSEKSSDLQWF-LFAVLIPRISPQ.............. 122
8 -6.670PF18380.1; A0A0C9TKC0_9HOMO/412-515; Holliday junction resolvase Gen1 C-terminal domain  ali follow..  13  23...................................................................................................................................................................EIDPTEFVAKARSGIQGTRIETEDSAAARFG--SDVEDDDGEEVGKKRRGTKPPPDPNSTLRIW--LPAVMVEYAYPELVASYREK...... 104
9 -6.660PF08701.11; E4ZLT5_LEPMJ/14-89; GNL3L/Grn1 putative GTPase  ali follow..  17  42PYKDKILAEVEEQRRKKEEEKARLKELARQQRSG............................................................................................................................................................................................................................. 75
10 -6.640PF13133.6; Q817E5_BACCR/23-83; Protein of unknown function (DUF3949 topsan)  ali follow..  11  3PIQYLYLQGLHEKKEKTGLSQRELYEKMSFGEEQ............................................................................................................................................................................................................................. 36
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.