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Query: PF04821.14; G8ZQM4_TORDC/41-358; Timeless protein, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst YKLGDDCLACLRDLKRWFKLVDDQQNRWDVAMACAEYCILIDDLLPILIDWENKCSLAAKLARKGQSQDFKSSAVRNKEYHDSIALNCLQLIVLMTWPLILTEQSPAHQVSLYTDLKKHQLSYKRHILTSENGKALKAANRLAFNILQIDKLERTPRDNMILRLVLNFFRNLLAIEPGELTISSKQHSSTRGINTTDMLPPGVSMDDISHNAVVSAFQRNKVLALLLTLASSSSSEFDQEFITIPLMEVMFYMVKEIDPKALIRNDPQKCGPDTSKEEHYSPVGLQLTELLEKERRLKKIVVQNTSTRHSRFGALLSILast
1 -110.000PF04821.14; G8ZQM4_TORDC/41-358; Timeless protein  ali  100  1YKLGDDCLACLRDLKRWFKLVDDQQNRWDVAMACAEYCILIDDLLPILIDWENKCSLAAKLARKGQSQDFKSSAVRNKEYHDSIALNCLQLIVLMTWPLILTEQSPAHQVSLYTDLKKHQLSYKRHILTSENGKALKAANRLAFNILQIDKLERTPRDNMILRLVLNFFRNLLAIEPGELTISSKQHSSTRGINTTDMLPPGVSMDDISHNAVVSAFQRNKVLALLLTLASSSSSEFDQEFITIPLMEVMFYMVKEIDPKALIRNDPQKCGPDTSKEEHYSPVGLQLTELLEKERRLKKIVVQNTSTRHSRFGALLSI 318
2 -6.340PF10487.9; G3AS50_SPAPN/57-968; Nucleoporin subcomplex protein binding to Pom34  ali follow..  9  638YEFTIALIKMTESLVQNCLSLDQDYPEKSKSVILSKIVTHLINLFESFIYCR----------------------FNKSYQKMEMGVLILDILSTILATVYGIDPDTPVEHKATKVFASSAVRILDAFLSSRAASPILTMIESLSQNLEMYELNDSSGFETWIRCCLSYSHLLITIRSTLSYPPSAFERNKDILDLLTSLTNAKWDQDSATPSLLSHLGSDFSQMLLHSLAADLDNSFDDYKLKVSLYDFICAVMMGGNQEGLS....................................................... 904
3 -6.320PF15776.5; F1PR12_CANLF/63-438; Proline-rich protein family 22  ali follow..  10  228............................................................................................................................................................PEKVLLEDAMKLFDCLPGNAEPEGFPRKAPGPALPDSRGGGDDSSSDIRSLHLPDELLS--FDYSVPEILDTVSN---------------VDCFFNFALDEEPPPRPGPPAANMVAPVVRPELPKRKAGSSSSKKGRQGGKGKQAVGLAGAAPSGLGAP... 374
4 -5.920PF01347.22; VIT_ICHUN/18-588; Lipoprotein amino terminal region  ali follow..  10  304..VHEDAPAKFLRLTAFLRNVDAG-VLQSIWHKLHQQKDYRRWILDAVPAMATSEALLFLK-----------RTLASEQLTSAEATQIVYSTLSNQQA-------TRESLSYARELLHTSFIRNRPILRKTAVLGYGSLVFRYCANTVSCPDESDRADEEEIVLALKALGNA----------GQPNSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNRKVQEIVLPIFLNVAIKSELR------IRSCIVFFESKPSVALVS---------------------MVAVRLRREPNLQVASFVYSQMR.......... 571
5 -5.840PF17421.2; Q77G90_SWPV1/1-92; Family of unknown function (DUF5409 topsan)  ali follow..  20  1.....................................................................................................................................................................................................................MLSYIINPLLSIVYFILGNVSK------LTYILMKIMIFLLRAVNPYSLISNRGWLSLDSINPFKKEKRRESFLSSLFRKEETKKKE.................. 84
6 -5.740PF15606.6; RHSA_ECOLI/1298-1372; Bacterial toxin 34  ali follow..  11  3....................................................................................................................................................................................................................................................LALDITMIASRGNVADTITDRVNDIINDRFWSDGKKPDRCDVLQELIDCSAKDAKSTQKAWNCRHSRQS..... 75
7 -5.690PF02377.15; G1N9T1_MELGA/33-190; Dishevelled specific domain  ali follow..  16  91..........................................................................................................................................................................................................................................................TLMSSELETTSFFDSDEDDSTSRFSSSTEQSSAS----RLMRRHKRRRRKQKAPRIERSSSFSSTMSL 158
8 -5.550PF04116.13; Q7D1P6_AGRFC/124-258; Fatty acid hydroxylase superfamily  ali follow..  6  23...................................................................................................................................................................................................................VFFWRFHALHHSVVRLWVVNTGRFHV-ADSLFKITLSQIPLYFMGAPLQVFWWLGAVTAFIGILTHCNVDMKTGLLDYIFSTPRLHRWHHSKQLPEGNTNYGENLVI 128
9 -5.520PF07136.11; L7VKA5_CLOSH/62-310; Protein of unknown function (DUF1385 topsan)  ali follow..  11  1.....................................................................................................................................................................LPVIRGAVNMIEAEKVDIEEEEESGFEKFLKKIFGDKLFQVMLYSSVVVALIFGICLFFLLPNWIAGWFGFDKSTTGGSILANLIEGLIR------LMYVWLVSKNKEIKRVFEYHGAEHNAIYAYESMEELTVENAIKHTTLHPRCGTTYLF 163
10 -5.480PF12231.8; Q5BCS0_EMENI/131-504; Rap1-interacting factor 1 N terminal  ali follow..  9  7....SSRIDAYMQFFGALRAYEKLPTEEEILHKMSLAEFIQRDILKLSVVLVWHPQISPQLPFKLFLIEHSVVCLESENLPKSVVTHYLTVLSTQKFPARIITAARTT------RILGMLHSITDRV---KGNSVISQRLMIYERLFDVAKPTFLALSTLWMDHLISGLLHLNALELGFNVYMASGSNSTLSKTLRDIFDRPLANNRKLVSEVSERMSRMQIWGVITLLLRSKRFNIDQWQHFKEWVLVLQKCFNCNDPE.......................................................... 291
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.