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Query: PF05007.13; PIGM_RAT/140-408; Mannosyltransferase (PIG-M), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst VSSRGNADSIVASLVLTTLYLIEKRLIACAAVFYGFAVHMKMYPVTYILPIALHLRPERDSDEGLRLARYSFQARLYDFLKRLCSWAVLLFVAIAGLTFLALSFGFYYKYGWEFLEHTYLYHLTRRDIRHNFSPYFYMLYLTAESKWSFTLGIAAFLPQFILLSAASFAYYRDLVFCCFLHTSIFVTFNKVCTSQYFLWYLCLLPLVMPLVRMPWKRAVVLLMLWFIGQALWLAPAYVLEFQGKNTFLFIWLAGLFFLLINCSILIQIILast
1 -133.000PF05007.13; PIGM_RAT/140-408; Mannosyltransferase (PIG-M)  ali  100  1VSSRGNADSIVASLVLTTLYLIEKRLIACAAVFYGFAVHMKMYPVTYILPIALHLRPERDSDEGLRLARYSFQARLYDFLKRLCSWAVLLFVAIAGLTFLALSFGFYYKYGWEFLEHTYLYHLTRRDIRHNFSPYFYMLYLTAESKWSFTLGIAAFLPQFILLSAASFAYYRDLVFCCFLHTSIFVTFNKVCTSQYFLWYLCLLPLVMPLVRMPWKRAVVLLMLWFIGQALWLAPAYVLEFQGKNTFLFIWLAGLFFLLINCSILIQII 269
2 -48.100PF06728.13; B9RC32_RICCO/30-452; GPI transamidase subunit PIG-U  ali follow..  15  145ACVGLSTSPIENLFVILTLYGACIRLVPLAAFGWVMATHLSLYPTILIIPVILLLGCGPDAPPQKLFNQSKPQIIVSWRPVMLFLFWAFLWSIYVLVLCSISVKQYGSLWECFSHLQTYGFILTVEDMSPNIGVLWYFFAEVFDF-FRNFFLIVFHTNILFMVLPLAIRLYHRPCFLAFVYIAISSMLKSYPSVGDSALYMGLLGLFLDELADMQFSFFIFCGYVGVSLLSPVMHNWIWRGTGNANFY--FATAIAY............ 422
3 -12.900PF05208.13; B7FU52_PHATC/1-358; ALG3 protein  ali follow..  14  125.......DGPTMLLLYISMLLFTWNRWNVGCVVFSMAVSIKMNVLLFAPGLLLLL------------------------------LQVGPDAQTVALRLGLGCALPQLILGAPFLTTYPVSYLRKA---FELDRVFFY-FLPEEVFLSKGWAKILVALHVGTLAFCATQQPEYVVYIMFLSNFIGIAFARTLHYQFYCWYFHGLPYLL---SIPSYPLLLKIVIMGCIEAAF..................................... 348
4 -10.500PF15971.5; D2RW44_HALTV/57-219; DolP-mannose mannosyltransferase  ali follow..  10  89.....WAQFYALFFGVLSLALALRDRPFLAGVAAALSAGSWQSGIAFAPLVVGMT...................................................................................................................................................................................................................... 138
5 -8.890PF05297.11; LMP1_EBVB9/1-386; Herpesvirus latent membrane protein 1 (LMP1)  ali follow..  18  34...................................................................................................................................LALLFWLYIVMSDWTGGALLVLYSFALMLIIIILIIFIFRRDLLCPLGALCILLLMITLLLIA---LWFLGIVLFIFGCLLVLGIWIYLLEMLWRLGATIWQLLAFFLAF-----FLDLILLIIALYLQQNWLLVDLL 172
6 -8.220PF09594.10; Q5Z2C4_NOCFA/88-323; Glycosyltransferase family 87  ali follow..  8  78....GQINLVLMAAVALDC--LVRKPFWPRGMLIGITVSIKLIPAGFLLYFLL--------------------------------RRDWKAAGTMVVSAIGAVGLGFLLFPSDYWLRTLA-RIGPPYFAGNQSLKGLAFRLGVPDSAATLIWLGLAVIAVALAALWMHRLIEA------VAALLVNAAAILLVS........................................................................... 235
7 -7.220PF17286.2; Q6FX40_CANGA/484-845; PRMT5 oligomerisation domain  ali follow..  12  68...................................................................................................................DIVSEFKIKHRAEVNALIGYF--AVLYGDVILSIVPEGTIVRVPQSKNNHEGEALHSTPDKSAHTNDNKYYFKKIDKTPGLTSWSPMIFPLSQPELSVMMSRRHNGKYTWY-----WSLESYVY.............................. 193
8 -7.100PF00660.17; E7KHT3_YEASA/13-116; Seripauperin and TIP1 family  ali follow..  16  20.............................................................................................................................DDVKTNIA------YITLSETPNSGFSLDQMPAGIMDIAAQLVANPSDDSYTTLYSEVDFSAVEHMLTM--VPWYSSRL................................................................. 91
9 -6.950PF05279.11; ASPH_MOUSE/52-307; Aspartyl beta-hydroxylase N-terminal region  ali follow..  22  5............................................................................................................................................................................................GGISGGSFFTWFMVI----------------ALLGVWTSVAVVWFDLVDYEEVLGK......................... 44
10 -6.740PF12337.8; Q9WJ28_PTV1F/33-99; Protein of unknown function (DUF3637 topsan)  ali follow..  23  6.......................................................................................................................IFSLKRKDKSHSYSPREIELKYNSD---------FAFKPRPLA------------PLLRLEPSDTTTRRIECAEVEYDLWY..................................................................... 65
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.