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Query: PF05150.12; A0A0W0SPB7_9GAMM/33-312; Legionella pneumophila major outer membrane protein precursor, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst TVPCEAKKWDIGVQALYLQPIYSSQRGYELTQSDTFREVEHDWDWGYRLEGSYHFSTGNDITMTWVHFDDDNSHHSGYAGVTPFSGPFLVPFGITIDNRFDQVNLVMGQHVDMGLLKDARFYGGLQYARIRLDATYNYAATIPVLAPAGFSQDRDADFNGVGPVIGIDYAYDLVRGFSITANTAGSILYGTSRFNNRFIFAPSGLVPINVYASKKSVVPSIEAKLGLKYAYEMPQGVFNIEGGYQVLNYFDALHVFNLAANLKNSDFGLYGPYLGAKWVGLast
1 -111.000PF05150.12; A0A0W0SPB7_9GAMM/33-312; Legionella pneumophila major outer membrane protein precursor  ali  100  1TVPCEAKKWDIGVQALYLQPIYSSQRGYELTQSDTFREVEHDWDWGYRLEGSYHFSTGNDITMTWVHFDDDNSHHSGYAGVTPFSGPFLVPFGITIDNRFDQVNLVMGQHVDMGLLKDARFYGGLQYARIRLDATYNYAATIPVLAPAGFSQDRDADFNGVGPVIGIDYAYDLVRGFSITANTAGSILYGTSRFNNRFIFAPSGLVPINVYASKKSVVPSIEAKLGLKYAYEMPQGVFNIEGGYQVLNYFDALHVFNLAANLKNSDFGLYGPYLGAKWVG 280
2 -63.200PF07585.11; Q7UY45_RHOBA/256-599; Putative beta barrel porin-7 (BBP7)  ali follow..  12  1.........WVRAEYLLWSLDGMDLPPLVTTSPDGNNTVLDSMRSGMRVTLGWSDDNGNGFELSGMGIFRDEETYQSNRGLLARPDFLAGSVNIQAENELASFEFNRRHSLSSMRGQRVDFLLGYRYGSLEEMLRIDQSSEYTAAQGPDLFDQFDAENQFHGAQVGLQLQRCSG-ATTWDAHAKIAFGVNRAETTIAGQTTNTAQSTNIGTYDDSSFMVLPEIGLNLTTQV---HRDMKLTIGYSMMIWSDVVRVEDAIDRNTTSSFIAHGLNIGATF.. 342
3 -25.500PF07239.11; C0DX39_EIKCO/30-267; Outer membrane protein OpcA  ali follow..  10  1..PINDGRYTVTAGYAHENAKIDQLK-------------YSGDGVTLQGRADIPLAQQHAIRAELGYRYLDSDAKANGE-----------KVINGAKTNNVDVYAGYLFSPSGFKNGGLRVGGGLGYSHGKMDLHSHQTDLDGDA--------VDISANNLYLKAQVEYEQQLGSGWSITPWTEAQVLHRRVEEKYTQIEFASDGRYKQNNYS-------LGLGVDVNKQLG-ESTSLTFGPYYRYARDKATSFTHEDENIEVPKTSRHSGIRGGVRF.. 238
4 -23.500PF06316.11; Q9LA63_9CAUD/1-199; Enterobacterial Ail/Lom protein  ali follow..  12  36...............................LQTHTDMPGSDDLNGINVKYRYEFTDTLGLITSFSYANAEGEQKTHYN----------DTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYALAGVSYARVSSFAGYVTLTSDEGKKQEHLTRSDSGRRSHTALTYSAGVQINPTENIVVDLAYEAS--RGDWRTEA--------------------------FIVGTGYRF................................................. 199
5 -22.900PF07437.11; YFAZ_ECOLI/1-180; YfaZ precursor  ali follow..  18  16........................................................................SASVNAMSISGQAGKEYTNIGVGFGTETTGLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATV---------GGKGVYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYSPDSLSSGIQS-----------------------YEEANAGARYTIM---RPVSIEAGYRYLNL--------SGKDGNRDNAVADGPYVGVNA.. 178
6 -21.700PF01389.17; OMP53_HAEIF/23-224; OmpA-like transmembrane domain  ali follow..  10  1..P-QENTFYAGVKAGQGSFHDGINNNGAIKKGLSSSNYGYR-TFTYGVFGGYQINFGLAAELGYDDFGRAKLRE---------------AGKPKAKHTNHGAYLSLKGSYEVLDGLDVYGKAGVALVRSDYKFYEDANGTR--------DHKKGRHTARASGLFAVGAEYAVLPELAVRLEYQWLTRVGKYRPQDKPNTAINYNPWIGC------------INAGISYRF................................................. 198
7 -18.700PF03922.14; Q98A70_RHILO/45-230; OmpW family  ali follow..  12  1....APSPWQIRLRALGVITEDSGYVNAVPGS-----GLSYSNTVTPELDISYFFTDNIAAELILGTTYANIDGQGAIGGLGKVG-----------KVWLLPPTLTLQYHFTDFGAFEPYIGAGVNYTIFYHQ--------------QVGSADDLKVKNTFGAALQVGFDYMVDQHWGVNFDVKKLFLKPDFDVTVAGAKLTGKAK-----------LDPWVIGAGLTYRF................................................. 186
8 -18.300PF05736.11; PORF_PSEFL/1-186; OprF membrane domain  ali follow..  7  43....................................SVKHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTG--------------SQKIGGDTSSLTAQYHFGQAGVDSLRPYVEGGFGHQSRGNV----------------KADGHSGRDQSTLAIAGAGVKYYFTNNVYARAGVEADYALDNGKWDYS-------------------------ALVGLGVNF................................................. 182
9 -17.900PF01278.20; COLY_YERPE/30-312; Omptin family  ali follow..  9  1....SPDSFTVAASTGMLSGKSH--MLYDAETGRKISQLDWKIKNVAILKGDISWDPYSFLTLNARGWTSLASGSGNMDDYDWMNENQSEWTDHSSHPATNEYDLNVKGWLLQDENYKAGITAGYQETRFSWTASYSYNNGAYTGNFPKGVRVIGYNQRFSMPYIGLAGQYRIND-FELNALFKFSDWVRAHDNDEHYMRDL-------TFREKTSGSRYYGTVINAGYYV---TPNAKVFAEFTYSKYDNSGDSVSIGGDAAGISNKNYTVTAGLQY.. 281
10 -16.300PF16961.5; Q5LG58_BACFN/59-257; Putative OmpA-OmpF-like porin family  ali follow..  15  28...........................................QWKLNLGGGVSFTNNPGYPAVPGTIDDSNKNNSADENMGEIPNYRAVADAQSFAYN---VSAGVDRYFNIKRVPNLMWYTGI-------RVGFAYGENEMKYDEETSMGKSIAESWNLRGALTIGVDYFVLPALYIGAQIDPFAY----TYNKTTYNPQAGLGDLSADSHNYSVLAAPTFKIGFKF................................................... 199
11 -15.400PF11557.8; Q7ME68_VIBVY/1-330; Solitary outer membrane autotransporter beta-barrel domain  ali follow..  8  39...............................................NFATAIVLTDSDVFTVGFHDFDPNEWLNLDNEELG-------SADSVNLRKKIGVSTLPFEFALYEDPDSQIKHSLQGRLSALGIEQDVSIVDTSVSD---------SHREYVLGAFLEYTNSRQLSENWTFDASIGAHLMYYRSDYTYRSDALADKSVIDGYLVNTDAWALVAEPNVQAKYLQMKPWGKWYYWSSAHYFYGQGWGEANRGQVGNPEGWYWVNGVKMFYDF.. 254
12 -13.900PF02462.15; P95343_NEIGO/52-174; Opacity family porin protein  ali follow..  12  1..........................................................................................................................AGYRINDLRFAVDYTRYKN---------YKAPSTDFKLYSIGASVIYDFDTQSPVKPYFGARLSLNRASAHLGG--------------SDSFSKTSAGLGVLAGVSYAV---TPNVDLDAGYRYNYVGKV---------NTVKNVRSGELSAGVRV.. 121
13 -12.800PF09381.10; D1AL54_SEBTE/71-353; Outer membrane protein G (OmpG)  ali follow..  7  42...............FGMTNYNENHDFDYSDWTRGNYLNRLELRAHYQFTDNDKYAVGLGAALRNYQWFHKDGTSPTTTNNRWLNIQPDWRYNFTSNLSYEGYSMFNDAQENGYSDKELETESGLKY-KFNDFISVRLNYYLDRGWNLGGPTENSFNNQQIRGYVPMNFAFFGEKTTTITPYFRQGFINKSWNAGANQANNEIDT----------------RLGLRIDQQL---PAGFAVSLEYAYEM-----RNQQDSAPGQKSFSKFHYTGVGLSY.. 283
14 -12.700PF17251.2; Q6MB36_PARUW/28-317; Protochlamydia outer membrane protein  ali follow..  8  39.....................................GLKGRTMLGYNFYGRASVNWGWIVDGDYKRTFSTYKSPVIAGFGSEDFVVTDTRRDVIDENFVYDLSIGVGYPFYFSCTLALSPVVGYALDSQHEQGGLGFDSTGAVNPNSYGSYTHKFNSRWYGPFVGVDFNYRPYGEWNLYAEVEYHFARFKGRYHDELLSQHHIHRSKHAHAWTFALGADYDFSNDWTAGLCVKFQDWTASRRHGHHGHVSSNSSDEIINLSGNEKWNSYAINLTFGK.. 288
15 -12.400PF01617.17; O52104_EHRCH/32-280; Surface antigen  ali follow..  9  5...................................................NFYISGKYMPSASHFG-VFSAKEEKNPTVALYGLKQDWNGVSASSHADADFNNKGYSFKYENNPFLGFAGAIGYSMGGPRIEFEVSYETFDVKNQGGNCALDRKASSTNATASHYVLLKNEGLLDISLMLNACYDVVSEGIPFSPYICAGVGTDLISMFEAINPKIS--YQGKLGLSYSI---NPEASVFVGGHFHKVAGNSSAATPDLATVTLSVCHFGVELGGRF.. 247
16 -12.200PF01856.17; O26005_HELPY/59-248; Helicobacter outer membrane protein  ali follow..  10  2......................................................................................................FEVGYKQFFGKKKWFGMRYYGFFDYAHNRFGVMKKGIPGNTLTERDSYQGQYYVNLFTYG--VGLDTLWNFVNKENMVFGFVVGIQLAGDSWATSISKEIAHYAKHHSNSSYSPANFQFLWKFGVRTHI---AKHNSLELGIKVPTITHQLFSLTNEKGYTLQADVRRVYAFQISYL. 187
17 -11.800PF12099.8; R5KMA1_9BACT/7-191; Protein of unknown function (DUF3575 topsan)  ali follow..  8  32..............................................PNIGVEASVGKKHTVQLFYGLNPWKQSGGD--------------------QSSLRHWTLMPEYRYWFCQSFN-GWFIGAHLM---GQFNMGSVDLPFGVFNELEDHRYEGWYAGGGITAG--YQWPLSKHWNIEASLGVGYDYIQYDKFRCGECGE------RLKSDHTNYFGPTKLALSVLYIF................................................. 185
18 -11.400PF16946.5; B8K3G3_9VIBR/48-336; OMPG-porin 1 family  ali follow..  16  117....QRTTPGGKVFGSYQLTDRLGMHGYALYHVEYKRGTGEFPYWEVEPGFSYKINDNTGAWLNFRYQEGQWKAKDGY------------------SETETEWIIKPGIWHNFGK-LSASLWGEFGSFEKSVDSTGAHAWTEDYS------------------KLGVSANYPLSKSWRMFG-----------EASYKKIDFASGPQRDEFDGYIP-------FILGVNYSF................................................. 289
19 -11.400PF14391.6; R7CWT2_9BACE/69-370; Domain of unknown function (DUF4421 topsan)  ali follow..  9  1...........NPDPRYITPNLYNEHYRIASSSEKEQSLTFVPTPSWRIGAYFGWSQKSEFNLSFKVKNVSGFDHIDSRQTFRFDGLKSEMKGINLYYIFNNRRFSYPAAYSQSTKSAGSLIAGFSYSRHKFLFDPGQLPEGISGQLEDNMRFRKIRYIDYSLNFGYGYNWVFAKNCLANLSVTPAVGYKASDICFENGAY---------NETDHNINFDVITRAAVVYNNT------KYYVGASLLAHTYDYHRKRFWINNTYGILQF---YVGFNF.. 302
20 -11.300PF13568.6; A6LDL5_PARD8/21-237; Outer membrane protein beta-barrel domain  ali follow..  5  9IIWSSLRGLEYTVKAGINIGGTAPVPLPREIRAIDSYRPTLCVSIEGDIKKWFGESKEWGMMLRLENKGMETKATVKNYSMEIIGSGGEKTGGVQTKVENSYFSIPVVALYQLNNRVSFS--AGPFVS-TNRNFSGYVYDGYSGDNRASYDFSDNLRKFQWGAQIGTE--WKAFKHLIVYADLTWGL............................................................................................. 212
21 -11.200PF11854.8; A1S4W3_SHEAM/64-698; Putative outer membrane beta-barrel porin, MtrB/PioB  ali follow..  6  344..........LGAKYRFSRQWDLDTLYRYDHNSYSELSRDSVFENHVEATVRGQIMAGWRVSLKGEVSARRGDSYQTSSNTQMPNQSAMDKRELRLMTDHYFADVSLQFNVHSGNEDYSESELGLGEVQLTEHLLLDTTQFGSNSGVSRWTGENRDEHTSAS--LGLKWQNLMDNKLSL----GLDYGYSDGNSDTEVSLGLSNIYGPYSATRH-------NVSAYANYQL---SDAMSLRIDWLYENY-SIPNLILLGSLSHDYQAHYLGFSFSYQW.. 635
22 -11.100PF00593.24; Q8P343_XANCP/286-782; TonB dependent receptor  ali follow..  9  190........VDLGIKSPSTEMTARETPGIAVEAPVATGSIKASESVLPQIGLGYRLAEGQEVFASY--------AENIAAFQGGGAGGPLLVTQASFDASVGALEPEKSRTLE----------AGYRFVRDRFEASLVGSLNPCASIQQGTTPACTTRFFNVGSV-GGELTWKPTSYLQWYNSAS-------INRSTYDDNYVQNGVTIATAGKTTVDTPKRMLASEIAFNYAGWNVNLRGKTGERFYTYTNDQGFGGYTSFDAGAGYEFQSLKLSLNYAS 465
23 -10.800PF03349.16; Q9KT62_VIBCH/16-428; Outer membrane protein transport protein (OMPP1/FadL/TodX)  ali follow..  13  207.........................................GWAVGFNLGTVYEMDENNRFGLSYR---------------YSPEFKAKDDYGQEITLPLDIAEFSGFHKIENT---QFAVHYSVQWIGWSDKIEFRNLVTSRSSVGALTKGSYDKMYE----HYSIGGTYYLNSDWTL----RAGYMYDTSAQDSRTSISVPDSDRQ--------------LSAGFTYNI---DDKSNVDFGFTYLMGKDVNDAGSKLTATTHADAILLGLQYSRTF.. 413
24 -10.600PF06629.12; Q47GV4_DECAR/36-256; MltA-interacting protein MipA  ali follow..  11  49.........................................DRKMGLGLAIEPRFGYKAGDGARLVGMNTRGKSIEGGPAFDWDLGFVSLSASLFTDLT-ESARLYAYRQIVKNETWKIGAFVGIDRM--SSRVSNYFFGVNELEASPDRPAFHTGS--ATNATAGFDGRYRLDKDYSVLFGLQQTRLGHEVAHSPIVETRQA-----------------TVAWLGIAWNL................................................. 221
25 -10.400PF13505.6; Q98N05_RHILO/16-224; Outer membrane protein beta-barrel domain  ali follow..  14  26......SGAYIGIGGGFASVHKFSVAPIIDFNGIGGNGVFGELTAGYDYMVSDRFLLGGFIDANGGNIGPSISIP---------------GADIDLTNSY-GFDVGLRAGYLLNPDTLGYVLGGYSWQHFKLDGS-------------GFAEGLNFTQNRSGYVLGVGMETVLRGNWTLKTEYRYA--YGDKSVIDFGGGSLNVEPSTHT------------FHIAANYRF................................................. 209
26 -10.000PF10626.9; Q5LEH6_BACFN/26-192; Conjugative transposon protein TraO  ali follow..  11  4...........................................MRGIQLTGGLGDGFGYHAGIAVSTYTKNAHHWVVG---AEYLEKRYGYRDCLYPASQLTGEGGYYLNFLSDRKKTFFAALGLSAL-----AGYETVNWGESLLPDGSRLTDEDNF--YGGALTLELSAYVTDKIVLLVNGRQRVLFGGDCGKFHTQ-----------------------VGVGIRFMI................................................. 167
27 -9.800PF06178.13; Q8ZQ33_SALTY/16-230; Oligogalacturonate-specific porin protein (KdgM)  ali follow..  7  2.......................SSYLQAATLDYRHEYADRTRINKDRIAIIEKLPNGIGFYVDASVKSGGVDGEQDKHLS---------------DLVANAIELGVSYNYKVTDNFVLQPGFIFESGPDTSIY-----------------------------KPYLRGQYNFDSGVYMAGRYR-------YDYARKTANYSDDEKTNRFDTYIGYVFDELKLEYNFTWMDS-TNYEHNVALAWKLNKSFTPYVEVGNVAVRNNTDERQTRYRVGLQY.. 213
28 -9.310PF10895.8; O83492_TREPA/57-224; Domain of unknown function (DUF2715 topsan)  ali follow..  9  5...............VFVSPKVGQVGAHPWGKEPAPRTDVLLYTPTLGLAVGVIAHNGFAFTTE---------------------------LDAGLAFLMFRAQFLVGWAIRSGKNFAFIPSLGVDIL-------------------------STQDDKLVGIPINLDFLIFFTKHVGLDFTFGSGVNVPLTKNLKKGANGNGQDLTWSNIWAKYCCTSLVMVKIGPVFRI................................................. 168
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 7 0 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lesley SA, Kuhn P, Godzik A., Deacon AM, Mathews I, Kreusch A, Spraggon G, Klock HE, McMullan D, Shin T, Vincent J, Robb A, Brinen LS, Miller MD, McPhillips TM, Miller MA, Scheibe D, Canaves JM, Guda C, Jaroszewski L, Selby TL, Elsliger MA, Wooley J, Taylor SS, Hodgson KO, Wilson IA, Schultz PG, Stevens RC. Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline. Proc Natl Acad Sci U S A. 2002 Sep 3;99(18):11664-9. Epub 2002 Aug 22.