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Query: PF05208.13; B7FU52_PHATC/1-358; ALG3 protein, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst LLIMELGLNVVVIRKVAYTEIDWEAYMQEVEFWLDGELDYRKIYGGTGPLVYPAGFLYLFAWLRKLTNSGNDIQTAQYIFAAFYVGTQFAVLLLYQQILSSWLGMAVLCLSKRIHSIFVLRLFNDGPTMLLLYISMLLFTWNRWNVGCVVFSMAVSIKMNVLLFAPGLLLLLLQVGPDAQTVALRLGLGCALPQLILGAPFLTTYPVSYLRKAFELDRVFFYKWTVNFKFLPEEVFLSKGWAKILVALHVGTLAFCATQQLAQAKRKTSKQIFLLDQSSSNQNARRISPEYVVYIMFLSNFIGIAFARTLHYQFYCWYFHGLPYLLWSIPSYPLLLKIVIMGCIEAAFLSFPATSWSSLast
1 -136.000PF05208.13; B7FU52_PHATC/1-358; ALG3 protein  ali  100  1LLIMELGLNVVVIRKVAYTEIDWEAYMQEVEFWLDGELDYRKIYGGTGPLVYPAGFLYLFAWLRKLTNSGNDIQTAQYIFAAFYVGTQFAVLLLYQQILSSWLGMAVLCLSKRIHSIFVLRLFNDGPTMLLLYISMLLFTWNRWNVGCVVFSMAVSIKMNVLLFAPGLLLLLLQVGPDAQTVALRLGLGCALPQLILGAPFLTTYPVSYLRKAFELDRVFFYKWTVNFKFLPEEVFLSKGWAKILVALHVGTLAFCATQQLAQAKRKTSKQIFLLDQSSSNQNARRISPEYVVYIMFLSNFIGIAFARTLHYQFYCWYFHGLPYLLWSIPSYPLLLKIVIMGCIEAAFLSFPATSWSS 358
2 -15.700PF15971.5; D2RW44_HALTV/57-219; DolP-mannose mannosyltransferase  ali follow..  11  1...................................GGVPYVDVWDVNPPVPF-----AITAALAVLSGGNMVLHGLSVILTLLVAAANILLVLVTGEDAAAVAAGLTMLVVPELFLLPLAGVWAQFYALFFGVLSLALALRDRPFLAGVAAALSAGSWQSGIAFAPLVVGMTYQRTGGKDVLRAIAGGGVVTGVVVL................................................................................................................................................................. 163
3 -12.900PF05007.13; PIGM_RAT/140-408; Mannosyltransferase (PIG-M)  ali follow..  14  8............................................................................................................................DSIVASLVLTTLYLIEKRLIACAAVFYGFAVHMKMYPVTYILPIALHLWAVLLFVAIAGLTFLALSFGFYYKYGWEFLEHTYLYHLTRRHNFSPYFYM-------YLTAESKWSFTLGIAAFLPQFILLSAASFAY----------------------------YRDLVFCCFLHTSIFVTFNKVCTSQYFLWYLCLLPLVM-RMPWKRAVVLLMLWFIGQALW.......... 232
4 -11.800PF09852.9; Q10XG3_TRIEI/32-516; Predicted membrane protein (DUF2079 topsan)  ali follow..  11  6.................YASYDQGIFNQVFWNSMHGHFFQSSLSSALSTNVHFTPALLLWLPIYVLFPYPITLTVLQVTLISVSGLVLYILARQHLQPQLSAMMSISFYGANAVIGPTLANFHDICQIPLFVFSLLLAMEKRWWSLFWILAVLTLAVRSGVVLFGVGFYLILSKRYPKIGLAICTLSFSYMIALTNLIMPVFSEDISQRFMMERFGQYEIIWGMMSNPWRLIKEIFTPFFGTLKYLLGQWLPLAFV-----------------------------PAVAPAAWMIAGFPLLKLFSAKGLSVLSITIRYMTVVPGLFYGA............................. 316
5 -10.700PF14897.6; D9S910_FIBSS/29-351; EpsG family  ali follow..  14  1ITFAILLIFLVCQEGFRWIGTDWLPYYRMFEYNLSGMVEF--------------GYVLFSTVVKTIRND-------SFFLLVIALIKYIALACLIKRFSINPLISLCIAYAIFIPLLGMNR---QFLALSVVFFSIYFIAEGKFSTFFLLICFASFFHKTALLFLPAYFL............................................................................................................................................................................................ 148
6 -10.400PF13231.6; Q2YBZ2_NITMU/191-351; Dolichyl-phosphate-mannose-protein mannosyltransferase  ali follow..  11  2...................................................HPPMVAWLIWLGTSI---GNSEFGVRVGAFLCGLITMGYLFALTRNLSATGIRAVLLLAILPFFFATGALMTTDAPLVAAWAATLYYLEQRAWLGVGIAFGLGILSKYTLGLVGIAALVFVIIDPVARRWLRHPYPYLAVLLALLLFSPVII........................................................................................................................................................... 160
7 -8.420PF03155.15; S8A5I1_DACHA/15-491; ALG6, ALG8 glycosyltransferase family  ali follow..  14  2.....TALKLLLIPAYRSTDFEVHRNWLAITHSLHPSKWYLEDTSEWT-LDYPPFFAVFEWVLSQVKNLNYGSVETVYFQRLSVIVSELVLVL--QAKKVANIISLSLLLSPAFLIIDHIHFQYNGMMFGILIFSLTDALNDNLLRSGILFAILLCFKHIYLYIAPAYFAYLLRRYCLGENIWDIQFANCIKLGVSIVSIFGVAFGPQLLSRLFPFSRLCHAYWAPNAWALYAFMDRVLIHAAPRLNLNIDTASLGSATRGL-PPRVTFLLTLVVQLVCLVKLFLQPSPMRFIGAVTLCGFASFMFGWHVHEK--AILLPLVPFSLLALQD-RRYLGAFRPLAVAGHISLFP...... 385
8 -8.420PF04188.13; Q6NKT6_ARATH/13-489; Mannosyltransferase (PIG-V)  ali follow..  12  64....................VVWDSFLRITECGYEYEQTYA-------PL-LPLSRTVFAPLVPLIGLRAVMVLSGFTVSNLAFIFAAIYLFRVLKDTEASFRASIIFCFN----SIFYSSIYSESLYALFSIGGVYHLLSGTSNVGVLWFALSGCARSNGILNAGYICFQTMHRA-RRAYLAMQVFIAGFLRCICICLPFVAFQAYGYYNICHGIPLLYNFIQSHYWGVGFLKYFQFKQLPNFLLASPILSLAVCSIMSYMKSRPELFISLGFQATEKEAPEKSGYLSADVFPFIVHLSFMVTTAFFIMHVQVATRFLSASPPLYWFASSL-YCAAYILLGTLLFS-NFYPFT.... 477
9 -7.980PF06728.13; B9RC32_RICCO/30-452; GPI transamidase subunit PIG-U  ali follow..  9  8LILIYFSQNLNLSSRPEVSTTSLRRLAEGYWLKQLSISPYAGSMYHGSPLL-----LSVLGPLYVKRIEGQNHVLCSLLFVIADFISAMLIRATGRKLQKAYRQSLESLDIVNIPEAALVYLWNSPIENLFVILTLYGACIRLVPLAAFGWVMATHLSLYPTILIIPVILLLGCGPDLFLFWAFLWSIYVLVLCSISVKQYGSLWECFSHLQTYGF-EDMSPNIGVLWYFFAEVFDFFRNFFLIVFHTNILFMVLPLAIRLYH---------------------------RPCFLAFVYIAISSMLKSYPSVGDSALYMGLLGLFL................................ 374
10 -7.160PF09594.10; Q5Z2C4_NOCFA/88-323; Glycosyltransferase family 87  ali follow..  16  1.................................................FTYPPLAALFFAPLALMP-----LVLAEVVVLATSLGCLGLTLWLVLARTMTTLVIAAVALALYLEPVRQTFGFGQINLVLMAAVALDCLVRKPFWPRGMLIGITVSIKLI-----PAGFLLYFLLRRDWKAAGTMVVSAIGA--VGLGFLLFPSDSAEYWLRTLDTGRIGPPYFAGN................................................................................................................................... 175
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.