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Query: PF05849.11; FIBL_BOMMO/18-256; Fibroin light chain (L-fibroin), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst PSVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGDYASQASAVAQTAGIIAHLSAGIPGDACAAANVINSYTDGVRSGNFAGFRQSLGPFFGHVGQNLNLINQLVINPGQLRYSVGPALGCAGGGRIYDFEAAWDAILASSDSSFLNEEYCIVKRLYNSRNSQSNNIAAYITAHLLPPVAQVFHQSAGSITDLLRGVGNGNDATGLVANAQRYIAQALast
1 -130.000PF05849.11; FIBL_BOMMO/18-256; Fibroin light chain (L-fibroin)  ali  100  1PSVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGDYASQASAVAQTAGIIAHLSAGIPGDACAAANVINSYTDGVRSGNFAGFRQSLGPFFGHVGQNLNLINQLVINPGQLRYSVGPALGCAGGGRIYDFEAAWDAILASSDSSFLNEEYCIVKRLYNSRNSQSNNIAAYITAHLLPPVAQVFHQSAGSITDLLRGVGNGNDATGLVANAQRYIAQA 239
2 -6.860PF00406.22; KAD2_CAEEL/31-217; Adenylate kinase  ali follow..  10  4.............PPGSGKGTQAPAFAQKYFSLATGDL------LRAEVASGSEFGKELKATMDAGKLVSVCKLIEQKLEKPECKYGFILDGFPRTSGQA------EKLDEILERRKTPLDTVVEFNIADDLLVRRITGRLFHIASGRSYHLPMKDDLTGEPLIRRSDDNEETLRKRL............................................................. 168
3 -6.240PF15935.5; I5B0B2_9DELT/91-316; RNase LS, bacterial toxin  ali follow..  10  54.ETTLTQYANQTIL----QGRPLYIYNVIKSFINELIDFDQVVEIESDLYKIDLKPDVVREELELFAVYGRFDEKILKVMTPALSLMKIDVELED---SCCIYPALRGLEGYIRMLLSEFSKEYK------------------GRLGSLFDENKSYETMLFLKDDIKNDVVCKSLQNAYFMYVKHRHPL.................................................. 222
4 -6.130PF16993.5; A8AWV1_STRGC/1-522; Accessory Sec system protein Asp1  ali follow..  11  382LDLKDFIKKSFKNSQAENPLPENQELEYRFRIITDELSLIQELDDTRLIIDLSEQPNLYTQIAG----------ISAGIPQINLVASDYVTHLQNGYILDSISQLAVAADYYLQGLKNWNQALIYSIEKIKLNTGH--------------QVIARWEKWLKEA............................................................................ 522
5 -5.390PF10952.8; F0LVC6_VIBFN/6-145; Protein of unknown function (DUF2753 topsan)  ali follow..  13  1...........................................................................................................................................................WEKHTLLADIAMQQADHLRSILHYQQALTLSDRIGVAEEIEL-EDRLMISVISCHNMAGFWRTIGDDQYELKYLELASERILTL 83
6 -5.310PF17114.5; S9VWV7_SCHCR/61-205; Gef2-related medial cortical node protein Nod1  ali follow..  8  28..GSFLFYVKDKIYEKAGHILDRPFCFALRKLVSDNSNEFFLQQVKSNFLSLPKI-----KIKMLSVFFSIVQIVLSKLRGGSHERVQFFASIAAVILPKEQINDMYQLVEYISLNAQKI....................................................................................................................... 143
7 -5.250PF15934.5; B3MK61_DROAN/489-722; Yuri gagarin  ali follow..  11  11.KLRSTDFSYNEI------------------YNETSTENPFCVAIMEMFDEKSEQTEKEYESLAANERLVCLKETLNDRNELINHLQSMIGNYSDMSENNRLKEENHDLKMKNSENIRKAREIAEQLNGQVTQRVEL--VNKYESLSSSFE-EQCQELKGANRRVQSLQTRLCQVEKLQEELRTERKMLREEVIA............................................ 187
8 -5.180PF11669.8; H9G3Z2_ANOCA/43-144; WW domain-binding protein 1  ali follow..  15  7......................................................................................................................................HCCGETGCCIYYYELWWFWLLWTVLFLFGCCCAYRHRR-AKLRLQQQQRQREINLIAYHGACNYPPSMVDLRMLASFKLPAYEEVAHRPTT.............. 96
9 -5.170PF01540.16; O53101_MYCHO/1-353; Adhesin lipoprotein  ali follow..  16  21PVATIS--NDDKLAEKNGKEKADAALKQANALVEELKKNPYSKILETLNKEIAEATKSFKEAGSYGDYPAIISKLSAAVENAKNEKKAIDDK---------NAQIAKELAERNAKIQSNIEELKKINNEAFELSKTVNKTIA-----KKFKIEASFKEQLENFADDLLDKS.................................................................... 180
10 -5.130PF18869.1; A0A1F7Z354_9BACT/11-156; RnaseLS-like HEPN  ali follow..  10  43...........................................................................................................AYEGFLKTLFRDLGFISDETYFGKRFRV-----------GKALNPALENHYREESIYDMLENYCQ-LPDALWETWKRGRNMLFHWFPNESNVISYGDAKQIIFEILETMDFA.................... 145
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;