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Query: PF05932.13; Q87P37_VIBPA/6-126; Tir chaperone protein (CesT) family, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120
# Score Template Links and tools%idFirst PLLDEFCRLNELPPLILEDGNRCQLLVDDRFVLYFTATEDDALMLSVAFGGLEKSGELRVRGLELLARANYQRVGSGNLALSLAPNGRQLVLAGRQPTEHLNSANLTVWFHEIIEQTELWQLast
1 -61.500PF05932.13; Q87P37_VIBPA/6-126; Tir chaperone protein (CesT) family  ali  100  1PLLDEFCRLNELPPLILEDGNRCQLLVDDRFVLYFTATEDDALMLSVAFGGLEKSGELRVRGLELLARANYQRVGSGNLALSLAPNGRQLVLAGRQPTEHLNSANLTVWFHEIIEQTELWQ 121
2 -11.700PF10722.9; D5UDP5_CELFN/56-183; Putative bacterial sensory transduction regulator  ali follow..  11  5..IASWMSDNQFS-YFIDNDGDLGGLWRGRLFYFFLFGQQAEILQVRGQWHRELAIERLEEVLDLCNEWN--AERIWPKAYVRVRDNGRVHVVAEVATHGATDAQLSQILFCGLSTGSM.. 121
3 -11.300PF07824.12; SIGE_SALTY/3-113; Type III secretion chaperone domain  ali follow..  17  2.LLNRLYDALGLDAPEDEP----LLIIDDGIQVYFNESDHT-----LEMCCPFMPLPDDILTLQHFLRLNY----TSAVTIGADADNTALVALYRLPQTS-TEEEALTGFELFISNVKQLK 107
4 -9.420PF05005.15; B4HZK7_DROSE/6-111; Janus/Ocnus family (Ocnus)  ali follow..  10  3..........GVPLVHISPEGIFKYVM-----INVIDGGDASKAVIRGFADCTWHADIFEREEEVFKKLGLRAECPGGGRIEHNPDKKYLKVYYSQGFGKADHAQTKRILAT......... 100
5 -6.480PF10646.9; Q2LUL5_SYNAS/68-182; Sporulation and spore germination  ali follow..  8  44.KVNTFPPEVKLRDLKIEKNQTAYVSFSKNLVQSHPGGSTSEMATVYSLTNSLTANIPEIKAVRILIEGR................................................... 112
6 -6.440PF02772.16; C7N539_SLAHD/146-265; S-adenosylmethionine synthetase, central domain  ali follow..  7  23PMPIYLAHRLSERLTEVRKDGTLNLRPDGKTQVSVRYVDGKPTQVEKVLISTQHAEEATIDQIRHDLIEHVINPVFEKEGVKLADDLEIYV.............................. 114
7 -6.370PF09346.10; A6CCT7_9PLAN/22-151; SMI1 / KNR4 family (SUKH-1)  ali follow..  15  86.......................................................................FAAVGNGNLICLKKNSECVFIWLHGNRSGYDECQLADTFQEFIEV..... 130
8 -6.300PF06448.11; F1NV02_CHICK/952-1063; Domain of Unknown Function (DUF1081 topsan)  ali follow..  15  15....NFCTKLLYSNASSMEAAYYPLTGETRFEVEIVSTGEVKEYSASANYDLQREGTDLVDTLKFAVQAEGVKQHEATLTFKYNRDRKILTSDVSIPDVDV.................... 112
9 -6.260PF16758.5; UL141_HCMVM/51-241; Herpes-like virus membrane glycoprotein UL141  ali follow..  11  4PVLVAEGEQVTIP---------CTVMTHSWPMVSIRARDGSDELILDAVKGHRLMNGLQYRLLGQIFSLTFNVSTDTAGMYELRNYSHGLIMQRFVILTQLETLSRPDALGRYSLGDQIW. 138
10 -6.180PF09938.9; A4XXS6_PSEMY/65-202; Uncharacterized protein conserved in bacteria (DUF2170 topsan)  ali follow..  6  29.................GADASLHVTMREYGDLPLFIAVFGEQIIVEALLWPATDVKDAKAFNEEVLRTHKLFPLSSIGLEKMVDGRDCYTMFGALSSSS-TLSDVVFEIELLADNV.... 127
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Harder T, Kolodny R, Sitbon E, Li Z, Godzik A. Using an alignment of fragment strings for comparing protein structures. Bioinformatics. 2007 Jan 15;23(2):e219-24.