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Query: PF05957.13; Q9HZG8_PSEAE/12-109; Bacterial protein of unknown function (DUF883 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .
# Score Template Links and tools%idFirst DELLAEFQALVADTEKLLQSTADVAGDQAEEIRGKIHDSLKRARDTLRDTKDSLKDNVRERSQAAVDATEVYVGEHPWQSIGIAAGVGFLLGLLVSRRLast
1 -44.900PF05957.13; Q9HZG8_PSEAE/12-109; Bacterial protein of unknown function (DUF883 topsan)  ali  100  1DELLAEFQALVADTEKLLQSTADVAGDQAEEIRGKIHDSLKRARDTLRDTKDSLKDNVRERSQAAVDATEVYVGEHPWQSIGIAAGVGFLLGLLVSRR 98
2 -12.600PF01387.17; F7GY62_CALJA/1-131; Synuclein  ali follow..  13  9SKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVTTVAEKTKEQVTNVGGAVVTGVTAVAQKTVE....................... 83
3 -11.400PF11098.8; A1BIR5_CHLPD/1-139; Chlorosome envelope protein C  ali follow..  10  64GAMLGRTGGVVGETIDRVAITVKDVSRSAGELYSDAVKNVDNVTDNAARAIGDAGVSASEAVRNIAGSFQKTTVKK...................... 139
4 -10.600PF17258.2; A0A059W5U3_STRA9/1-224; Family of unknown function (DUF5324 topsan)  ali follow..  10  4...KDSVRAATHSAKDGVRHAAEVVAPYAGTAKDAAVHYSQEARTRLAPRVAEAAQQARAQYDTHLSPRIEHARGA...................... 76
5 -10.400PF01442.18; L9KQJ6_TUPCH/68-256; Apolipoprotein A1/A4/E domain  ali follow..  18  7DTLGSTFQKVHEHLGPVAQEFWEKLEKETEELRREINKDLEDVRQKTQPFLDEIQKKWQEDLERYRQKVEPLSAQ....................... 81
6 -9.670PF09769.9; E9DTQ5_METAQ/98-227; Apolipoprotein O  ali follow..  12  1...........KEKKPRGPSPTDRLAVQIGKVRMALYRFAVCTENKVNETMDSAFNLEQSFTNTIASLAPSRESGEKLMPGTIYVLVAAMAGSILTRN 87
7 -8.700PF12732.7; F8EDB6_RUNSL/8-87; YtxH-like protein  ali follow..  14  24TEIRDKVRETANGFASDLLDALQRGRQQYTDIKDNVEDKAKELKSKADEKITEVKDR......................................... 80
8 -8.270PF06040.11; Q8UY74_9ADEN/13-145; Adenovirus E3 protein  ali follow..  11  19......FQPFLPGTYQCVSGPCHHTFHLIPNTTASLPTNNQTNLHQRHRRDLSESNTTTHTGGELRGQPTSGIYYGPWEVVGL-ITLGLVAGGLL... 106
9 -8.150PF00430.18; ATPF_SHIDS/6-137; ATP synthase B/B` CF(0)  ali follow..  43ERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREELRKQ-VAILAVAGAEKII........ 131
10 -7.740PF16995.5; W5T6G6_9NOCA/51-261; Transmembrane region of lysyl-tRNA synthetase  ali follow..  26  24....................................................SISPGLRFITSAPRHYIDAYYFDAPDTNLMWAVIVGLLAGATASRK 69

FFAS is supported by the NIH grant R01-GM087218-01
1 4 5 9 0 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.