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Query: PF06030.12; Q8Y9H6_LISMO/31-150; Bacterial protein of unknown function (DUF916 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120
# Score Template Links and tools%idFirst FSVKAILPDNQASSVTYFDLQMNPKQKQTLKVEITNHSKEEITVNCVANTAVTNEMGYVDYSIPNTKPDKTLKYPFADIVKESVSEVTLKPNETKIWTAAIQMPAENYDGIILGGLHFQELast
1 -70.500PF06030.12; Q8Y9H6_LISMO/31-150; Bacterial protein of unknown function (DUF916 topsan)  ali  100  1FSVKAILPDNQASSVTYFDLQMNPKQKQTLKVEITNHSKEEITVNCVANTAVTNEMGYVDYSIPNTKPDKTLKYPFADIVKESVSEVTLKPNETKIWTAAIQMPAENYDGIILGGLHFQE 120
2 -15.800PF06280.12; C5AP_STRP1/597-707; Fn3-like domain  ali follow..  17  7........................SDKFEVTVTVHNKSDKPQELYYQAT------------VQTDKVDGKLFALAPKALYETSWQKITIPANSSKQVTIPIDVSQFS-NGYFLEGFV... 94
3 -13.600PF10633.9; Q67M97_SYMTH/263-339; NPCBM-associated, NEW3 domain of alpha-galactosidase  ali follow..  19  1.....................AVAGRKNGVTLEVKNTGTTEITFASTLPPNWT--------------------------ATFSPDSIALAPGESRQVTVEVTPNSKALAGDYLVTLRARS 77
4 -11.000PF11614.8; Q2YM86_BRUA2/388-513; IG-like fold at C-terminal of FixG, putative oxidoreductase  ali follow..  13  18............DRTPQYVLLSDGSIRNGYTVKLLNMIPTPRTFQLSIQG----------------LPEATLTVQDETPDANGNYAIAVEPDKLKNLRVFVTMPHDAVTE.......... 99
5 -9.650PF15780.5; G3VKZ4_SARHA/34-131; Abnormal spindle-like microcephaly-assoc`d, ASPM-SPD-2-Hydin  ali follow..  15  1.AFLRLSHFSRPPFLCFGDVRV--GVSRTLPLVLDNPNEEGVEVSVARLPAADKG------------------------FSISPQSCALQSKERISLSITWT-PAKE--GRVREMITFLV 90
6 -9.620PF11611.8; A4J6Q2_DESRM/57-186; Domain of unknown function (DUF4352 topsan)  ali follow..  13  14YVASDIKTATVIGSNPYLQKK-TEEQFLLVKIKVTNNDKEARTIDTNLFKLFDTQGKEYSAMGEADLYVNNDSHFFLE---------QVNPGMSRSGFIVFEIPKGM............. 110
7 -9.410PF01345.18; Q9RWI2_DEIRA/209-325; Domain of unknown function DUF11 topsan  ali follow..  5  9....................EVRAGGETTVNLTLTNNGGDSREAVLTDLLNTPELRD-FVFVSGSARLGGNARDAVIEYTADGSSW-SVPAGGSLQLSFTLRAPRVT............. 109
8 -9.300PF12690.7; C4L5A1_EXISA/43-141; Intracellular proteinase inhibitor  ali follow..  14  7....................YDASAKTLSATISMTNPNEEAVDVTFNSSQLVVKKGDQTVFDYGS-----------DYMFTESVIEEKWEANDK--KVFDEVFPLTLEPGEY........ 88
9 -8.660PF02102.15; PLNC_PENCI/1-351; Deuterolysin metalloprotease (M35) family  ali follow..  16  14..AQNVYAFPIESDLSALDVTLSQVSDTRIKAVVKNTGAENVTFVHLNFFRDSAPVKKVSVYRENNEVVDGIKRRFQLQGLASESLTTLEAGEVLEDEFDIA.................. 114
10 -8.270PF16116.5; R6Y5S7_9BACT/235-498; Domain of unknown function (DUF4832 topsan)  ali follow..  12  149.............QEMTAPAVLLAGQANPVEISLINRGFSTLFNEHPVYLVLIDESGKVCHV-------ALTDANVNDWQPYETGDSSCTP-LLHTISTDLQIPLGLAKGMYSLGLWIPD 247
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;