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Query: PF06316.11; Q9LA63_9CAUD/1-199; Enterobacterial Ail/Lom protein, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRKLCAVILSAVVWLVAAGTPASAAEHQSTLSAGYLQTHTDMPGSDDLNGINVKYRYEFTDTLGLITSFSYANAEGEQKTHYNDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYALAGVSYARVSSFAGDYVTLTSDEGKKQEHLTRSDSGRRSHTALTYSAGVQINPTENIVVDLAYEASGRGDWRTEAFIVGTGYRFLast
1 -96.100PF06316.11; Q9LA63_9CAUD/1-199; Enterobacterial Ail/Lom protein  ali  100  1MRKLCAVILSAVVWLVAAGTPASAAEHQSTLSAGYLQTHTDMPGSDDLNGINVKYRYEFTDTLGLITSFSYANAEGEQKTHYNDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYALAGVSYARVSSFAGDYVTLTSDEGKKQEHLTRSDSGRRSHTALTYSAGVQINPTENIVVDLAYEASGRGDWRTEAFIVGTGYRF 199
2 -54.400PF05736.11; PORF_PSEFL/1-186; OprF membrane domain  ali follow..  17  3LKNTLGFAIGSIIAATSFGALAQGQGAEGELFYKKQYND-SVKHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRS----NDGTGSQKIGGDTSSLTAQYHFGQAGVDSLRPYVEGGFGHQSRGNVKAD-----------------GHSGRDQSTLAIAGAGVKYYFTNNVYARAGVEADYALDNGKWSALVGLGVNF 182
3 -51.600PF01389.17; OMP53_HAEIF/23-224; OmpA-like transmembrane domain  ali follow..  14  2......................QENTFYAGVKAGQGSFHSNYGYRRNTFTYGVFGGYQINFGLAAELGYDDFGRAK-----LREAGKPKAKHTNHGAYLSLKGSYEVLDGLDVYGKAGVALVRSDYKFYEDANGTRDHKK---------GRHTARASGLFAVGAEYAVLPELAVRLEYQWLTRYNPWIGCINAGISYRF 198
4 -41.000PF13505.6; Q98N05_RHILO/16-224; Outer membrane protein beta-barrel domain  ali follow..  13  5...LMSAAQAADVVQPVEASGFNWSGAYIGIGGGFGASVHKIGGNGVFGELTAGYDYMVSDRFGGFIDANGGNIGPSISIPGADIDLTNS-----GFDVGLRAGYLLNPDTLGYVLGGYSWQHFKLDGSGFAE--------------GLNFTQNRSGYVLGVGMETVLRGNWTLKTEYRYAAYGEPSTHTFHIAANYRF 209
5 -40.100PF07437.11; YFAZ_ECOLI/1-180; YfaZ precursor  ali follow..  12  1MKKIALAGLAGMLLVSASVNAMS-----ISGQAGKEYTNIGVGFGTETTGLALSGNWTHNDDAGVGLGLNLPLGPLMATVGGKGYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYSPDSLS--------------------------SGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGKDADGPYVGVNASF 180
6 -38.500PF03922.14; Q98A70_RHILO/45-230; OmpW family  ali follow..  12  1......................APSPWQIRLRALGVITEDSGYSYSNTVTPELDISYFFTDNIAAELILGTTYANIDGQGAIGGLGK-VGKVWLLPPTLTLQYHFTDFGAFEPYIGAGVNYTIFYHQQVG---------------SADDLKVKNTFGAALQVGFDYMVDQHWGVNFDVKKLFLKKLDPWVIGAGLTYRF 186
7 -36.300PF02462.15; P95343_NEIGO/52-174; Opacity family porin protein  ali follow..  20  1......................................................AGYRIND-LRFAVDYTRYKNYKAPST----------DFKLYSIGASVIYDFDTQSPVKPYFGARLSLNRASAHLG-----------------GSDSFSKTSAGLGVLAGVSYAVTPNVDLDAGYRYNYVGNVRSGELSAGVRVKF 123
8 -32.200PF16946.5; B8K3G3_9VIBR/48-336; OMPG-porin 1 family  ali follow..  13  132.......................TDRLGMHGYALYHVEYKRGTGEFPYWEVEPGFSYKINDNTGAWLNFRYQEGQWKAKD--------GYSETETEWIIKPGIWHNFGKSASLWGEFGSFEKSVDST---------------------GAHAWTEDYSKLGVSANYPLSKSWRMFGEASYKKIDDGYIPLFILGVNYSF 289
9 -29.800PF16941.5; F7YR64_VIBA7/1-344; Putative cyclodextrin porin  ali follow..  10  162...............LTYWNNEYSWGFYSNLEYLYSKEDKSEWGERTETGYSILFRPYKR--LGLEMYYQIKDNEDY-----QSNGNINEISDFTEKYIEPVVQYSFDDAGTLYVRARLGDNETNNASNS--------------GGGNANVDYFKDIRKATLGYEQAVGDSWLVKGEYEFANEVELTQHTVYLQALYRF 344
10 -27.000PF01617.17; O52104_EHRCH/32-280; Surface antigen  ali follow..  11  22............FSAKEEKNPTVALYGLKQDWNGVSASSHADADFNPFLGFAGAIGYSMGG-PRIEFEVSYETFDASSTNATASHYVLLKNEGLLDISLMLNACYDVGIPFSPYICAGVGTDLISMF----------------------EAINPKISYQGKLGLSYSINPEASVFVGGHFHKVASVCHFGVELGGRFNF 249
11 -26.100PF16961.5; Q5LG58_BACFN/59-257; Putative OmpA-OmpF-like porin family  ali follow..  1..................................YEVRALSTNWADKKLMVGFEGGWFFKDQWKLNLGGGVSFTNNDENMGEIPNYRAVADAQSFAYNVSAGVDRYFVPNLMWYTGIRVGFAYGENEMK----------YDEETSMGKSIAESWNLRGALTIGVDYFVLPALYIGAQIDPFAYTSADSHNYSFKIGFKF 199
12 -26.000PF16956.5; Q3IIM9_PSEHT/1-267; Putative general bacterial porin  ali follow..  12  1MKKLAVIISSILLSSAATTA-MAADSYQSISNLGFKHETSSNNNGSHNEFYTLSGGFFFNPNLLAKVTLVENKNGEDFALFDLAYNTVTADDDFDYRAVAAKYFIDLQQGNFLTFEGKYESIDDKENQWVAETNYYFSKATSVFANYNKQDA-------YSFGAQHFINENVGIKVGYGNNA-DDSGNDAYFANMRFQF 267
13 -25.300PF07239.11; C0DX39_EIKCO/30-267; Outer membrane protein OpcA  ali follow..  11  3........................NDGRYTVTAGYAHENAKIKYSGDGVTLQGRADIPLAQQHAIRAELGYRYLDSDAKANGEKVINGAKTNNVD-VYAGYLFSPSGFKNGGLRVGGGLGYSHGKMDLHSHQTDLDGDAVDISANASDGRYKQNNYSLGLGVDVNKQLGESTSLTFGYRYARDKATSFTHFGIRGGVRF 238
14 -23.700PF13568.6; A6LDL5_PARD8/21-237; Outer membrane protein beta-barrel domain  ali follow..  15  1..........AQQERNQGIIWSSLRGLEYTVKAGINIGGTAPVPLPRSIEGDIKKWFGESKEWGMMIGLRLENKGMETKATVKNTGGVQTKVENSYFSIPVVALYQLNNRVSFSAGPFVSFVYDGYLREINPTGTKVEFSGDNRASYDFSDNLRKFQWGAQIGTEWKAFKHLIVYADLTW................... 210
15 -23.600PF05150.12; A0A0W0SPB7_9GAMM/33-312; Legionella pneumophila major outer membrane protein precursor  ali follow..  12  32...................................QSDTFREVEHDWDWGYRLEGSYHFSTGNDITMTWVHFDDDNSHHSGYAVPFGITIDNRFDQVNLVMGQHVDMGLLKDARFYGGLQYARIRLDAT-YNYAATIPVLAPAGFSQDRDADFNGVGPVIGIDYAYDLVRGFSITANTAGS-YGTSRFNNAKLGLKYAY 231
16 -22.100PF09381.10; D1AL54_SEBTE/71-353; Outer membrane protein G (OmpG)  ali follow..  112..............IQPDWRYNFTSNLSYEGWLGLYSMFNDNGYSDKELETESGLKYKFNDFISVRLNYYLDRGWNLGGPTENSFNNQQIRGY-----VPMNFAFFGEKTTTITPYFRQGFINKSWN-------------------AGANQANNEIDTRLGLRIDQQLPAGFAVSLEYAY-QKSFSKFHYTGVGLSY.. 283
17 -21.600PF11854.8; A1S4W3_SHEAM/64-698; Putative outer membrane beta-barrel porin, MtrB/PioB  ali follow..  10  435...............LRLMTDHYFADVSLQFNVHSGNEDYSESEEVQYTGFGMNAGYPLTEHLLLNGFLGMDWRDTTQFGSNSGVSRWTGENRDEHTSASLGLKWQNLMDNKLSLGLDYGYSDGNSDTEVSLGLSNIYGPYSATRH------------NVSAYANYQLSDAMSLRIDWLYENYSDYQAHYLGFSFSYQW 635
18 -21.400PF01278.20; COLY_YERPE/30-312; Omptin family  ali follow..  14  1......................SPDSFTVAASTGMLSGKSHEMLYDAETGLKGDISWDPYSFLTLNARGWTSLASGSGNMDDYDSHPATNVNHANEYDLNVKGWLLQDENYKAGITAGYQETRFSWTATGGSYSYNNGAYTGNRDLTFREKTSGSRYYGTVINAGYYVTPNAKVFAEFTYSKYDSNKNYTVTAGLQYRF 283
19 -21.300PF12099.8; R5KMA1_9BACT/7-191; Protein of unknown function (DUF3575 topsan)  ali follow..  1.......ICAVLAMSALTAAYGQKIALKTNA----------------TTTPNIGVEASVGKKHTVQLFYGLNPWKQSGG----------DQSSLRHWTLMPEYRYWFCQSFNGW------FIGAHLMGGQFNMGSVDLPFGVFNELEDHRYEGWYAGGGITAGYQWPLSKHWNIEVGYDYIQYDKFRCGELALSVLYIF 185
20 -20.600PF06178.13; Q8ZQ33_SALTY/16-230; Oligogalacturonate-specific porin protein (KdgM)  ali follow..  10  1....FSSYLQAATLDYRHEYADRTRINKDRIAIIEKLPNHLSDLVANAIELGVSYNYKVTDNFVLQPGFIFESGPDTSI-----------------YKPYLRGQYNFDSGVYMAGRYRYDYARKTANYSDDEDELKLEYNFTWMDSDQIKFDNKKTNYEHNVALAWKLNKSFTPYVEVGNVNNTDERQTRYRVGLQYHF 215
21 -20.000PF07396.11; Q7MX84_PORGI/78-408; Phosphate-selective porin O and P  ali follow..  176..............................LHMRYAVSMAHQAQERNMWYFTAGNLFNPGKRINGYLDLTYSIEGDDKGIMTARYGKGKTLTDVKYYALVSKWNFRIFDQVNLFLKGMYENGYAPAQYG--------------------ESSHTRHSYGYMGGVEY-TETNFRLFVTYIGRHYRTESTNALRAGLIYQI 331
22 -19.600PF07585.11; Q7UY45_RHOBA/256-599; Putative beta barrel porin-7 (BBP7)  ali follow..  16.........LPPLVTTSPDGTDPEDTGVLGQAGTTTLFGNNTVLDSMRSGMRVTLGWSDDNCNGFELSGMGIFRDEETYQSNRGSVNIQAENELASFEFNRRHSLSSMRGQRVDFLLGYRYGSLEEMLRIDQSSEYTAAQGPIDLFDQFDAENQFHGAQVGLNLTTQVHRDMKLTIGYSMMTTSSFIAHGLNIGATFQF 344
23 -18.000PF01308.17; MOMPD_CHLTR/1-393; Chlamydia major outer membrane protein  ali follow..  13  1MKKLLKSVLVFAALSSASSLQALPVGNPAEPSLGILWEGFGGDPCDPCATISMRVGYYFDRVLKTDVNKEFNSAAPSTLTARENPAYGRHMQDAEMFTNAACMALNIWDRFDVFCTLGATSGYLKGNSASFNLVGLFGDNENQKTVKAESELYTDTTFAWSVGARAALWECATLGASFQYAQS-KPKVEELNVL..... 228
24 -17.800PF04338.12; Q74AK7_GEOSL/122-330; Protein of unknown function, DUF481 topsan  ali follow..  16  17.............ATLSTLFQVRTKRHRFTVEAKYAYGEADSRTTVRNSLGSLKYDFFTTDKVYTYAQTLLEKDSFANLNL-------------NTEGLGVGYQFFDDRTLNLYAEAGISYFNEDVIEGEDRQDVPDRLKIFHRQEGYYTPSVSGVTLRADQGVRISLVNDIAANLEVDYRFNSRPEAGLFIMGLTYQY 209
25 -17.200PF00267.21; OMPF_ECOLI/28-362; Gram-negative porin  ali follow..  168................GVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGWATGLKYDANN-IYLAANYGETRNATPITNKFTNTSGFANKTQ----DVLLVAQYQFDFGLRPS--IAYTKSKAK---------------------DVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKDTVAVGIVYQF 335
26 -16.800PF11059.8; Q6LS16_PHOPR/28-325; Protein of unknown function (DUF2860 topsan)  ali follow..  10  105..................................FLVNENRTETDTKIKGFRFQYKNILGSNFSMETSVGQQEEKSGQKQNLSETEIASLDREGNIIYLEGAYRQPIAPGRLLRGALNYTRFDADGDAMSYDTYGAQLSAQYEAENPVFDEKQKDDLWSVFLAYEYNEPTDWGLVSLIGYNTTDNEDTLMATVGINYK. 298
27 -16.700PF05538.11; PORA_CAMJE/1-424; Campylobacter major outer membrane protein  ali follow..  12  229........VAFFYAVDAAYSTTIFDGINWTLEGAYLGNSLDSELDDNGNLFALKGSIEVNG-WDASLGGLYYGDKEKASTVVIEDGSRLNGDTGRNIFGYVTGGYTFNETVRV----GADFVYGGTKTEAANHLGGGKKLE------------------AVARVDYKYSPKLNFSAFYSYVNLDSADHSTVRLQALYKF 424
28 -16.700PF11389.8; I0XL34_9LEPT/28-301; Leptospira porin protein OmpL1  ali follow..  12  64...................................GLISAKTNGGMTGLTLSFGYEQDFGKAFFWRVNAHYTGGDTEAKFAGQSFYHMIWDYNAIQIPINIGIKLSVSEDAAIYIGAGIHYFKGGWSLAGHNRLNDADGTDPSANWENTKFNVSGVAPNWLIGAQARMSDKGHIYMEMETLFSFQYGITQYRIGYKHEI 274
29 -16.300PF10082.9; Q1QI05_NITHX/173-566; Putative beta-barrel porin 2  ali follow..  11  252..............................ASIGYAARSYADPRLNQLTGLLTDASLIWSATPLTTAKFISVTSVDESTLAGVSGVLTR--------TYTFEVDHDFRRWLTAIGRFTYGTRDYQ------------------------GSSRSDEIYSLSGDLVYKLTREFQIKAQVRRDILASSASTVVMLGVRLQ. 393
30 -16.300PF17251.2; Q6MB36_PARUW/28-317; Protochlamydia outer membrane protein  ali follow..  12  1.............................TFEVGYRHDDISWNQKAPSYNIGLKGRTMLGYNFYGRASVNWGGFGSEDFVVTDTRRDVIDENFVYDLSIGVGYPFYFSCTLALSPVVGYALDSQHISVEQGGLGFDSTGAVNPNSYGHIHRSKHAHAWTFALGADYDFSNDWTAGLCVKFQDWTKWNSYAINLTFGKQF 290
31 -16.000PF10626.9; Q5LEH6_BACFN/26-192; Conjugative transposon protein TraO  ali follow..  7............................IQLTGGLSDNMRWKNGDGFGYHAGIAVSTYTKNAHHWVVGAEYLEKRYGYR---------DCLYPASQLTGEGGYYLNFKKTFFAALGLSALAGYETVNWGE---------SLLPDGSRLTDEDNFIYGGALTLELSAYVTDKIVLLVNGRQRVLFGGDCGKFHVGIRFMI 167
32 -15.800PF06629.12; Q47GV4_DECAR/36-256; MltA-interacting protein MipA  ali follow..  12  37.............................PLRAGVYFWGSEDRKMGLGLAIEPRFGYKAGDG-SIEGGPAFDWDLGFVSLSASLFTDLTNSSRGESARLYAYRQIVKNETWKIGAFVGIDRMSSRVSNYFFGV-----NELEASPDRPAFHTGSATNATAGFDGRYRLDKDYSVLFGLQQTRLGHEVAHSAWLGIAWNL 221
33 -15.700PF06727.11; G4SX63_META2/42-373; Protein of unknown function (DUF1207 topsan)  ali follow..  12  111.KDIGSVSFGETIPFYRANFGETSAQWETGIQASVFSDFNLGAESTDLVNTDFIASLYSSGQFSAFGRIYHQSSHLGDEFLLRQIGTKFERVNLSYEGVDLRLSYELPFGVRIYGGGGGLFHREPDDLKIWSAQYGVEFRSPWRMEFADEENKWNTDVSARAGVEFE-GRKLQLLVEYPSGQFYNDKVEYVGIGAHYHF 332
34 -15.100PF04575.13; A6VQE8_ACTSZ/196-486; Protein of unknown function (DUF560 topsan)  ali follow..  81...........ITNRTYLGYRHKSAKTAWSVLPFYERQWYATHRYKKATGVRGELNHWLNRNWQISTALEYGKEQYHRNALLDGQRAQARHYGYDLKTARIGWGQEWERGISTRLGFAVSKREYK-------------ADHVLGNVFYFSKPREDDIYNINASLWKRDWHGITPKLRFNWKKQRSYIDRSITVSVEKTF 291
35 -14.900PF03349.16; Q9KT62_VIBCH/16-428; Outer membrane protein transport protein (OMPP1/FadL/TodX)  ali follow..  12  37..........AAVMSRNPAAMALFDEMALSLGFETITTMIDVKNVSYRGVLNIHLIVPVNEQFAWGVNAYSNFGTKTEFSDSYPASEYGGLTDVKSFNLGLAGSYRVNKEWSFGAGLDLIYGQGTMKRISTIVVNPTTVIPARGTSLLNVDKADGWAVGFNLGTVYEMDENNRFGLSYRYSPEFKAK-DIAEFSGFHKI 262
36 -14.800PF09411.10; A9IIE7_BORPD/46-180; Lipid A 3-O-deacylase (PagL)  ali follow..  12  3..................................................TELVYETPGLQLYKSDGNWGRVDLTGEFGVAYWSANGSRSPSHVWQFNAIPMFRWWMSERFYVEAGIGATAFT--------------------HTKFADERISTAFQFGDHIGMGFLVTPHNRLGLRYSHFSNASIKLDVLQLTYTYQ. 135
37 -14.300PF01856.17; O26005_HELPY/59-248; Helicobacter outer membrane protein  ali follow..  11  1.............................GFEVGYKQ------GKKKWFGMRYYGFFDYAVGDSGFIYNSFSFGGNTLTERDSYQGQYYVNLFTYGVGLDTLWNFVNKENMVFGFVVGIQLA-----GDSWATSISKEIAHYAKHHSNSSYSPANFQFLWKFGVRTHIAKHNSLELGIKVLQADVRRVYAFQISYLRDF 190
38 -14.000PF03687.13; Y865_TREPA/77-385; Uncharacterised protein family (UPF0164 topsan)  ali follow..  2VRRAVSGTSVTPVVAMAAKTSEKQKGVGRYEMLGLAFTALADDASFNAAGSAAFPYLLVGKGISVGTNVKVGYRDSSAGGERNKKNQGGKKHVVVTADIGLQGTWSVAKNFG---WVGGTVKNVGLSVEVDASNSGSSMSGGRTVHANVQEFADNNRFRYGVAFLLLPVQYVAFGSNVFL---GLASDIRASAGVEFKS 303
39 -13.900PF11383.8; B7VSE9_VIBTL/19-333; Protein of unknown function (DUF3187 topsan)  ali follow..  1LRALLSISVSILTFFHPTASANASRVGTIEFKSSYTQASIWAHTSAYQNQSNIAIEWQASPIWKTELDYRVVTAKDNGNHAGVHLSDFEGDDLTNALTFYNELLLHSRGPMSLSVGGSLFYNNVKSGRFARTSFEQGTVGLVHRNGDDYLVSLEGFSASWALGYEYMFNARHSLLVESLNYQ--SEPSNEVVLGYRYRF 283
40 -13.500PF07642.11; Q0BRB4_GRABC/58-438; Putative beta-barrel porin-2, OmpL-like. bbp2  ali follow..  12  179.NSRPSGVFGFQLNNLMNGKLSILALTNIGPETGSLAVGPEVANSALRFFDDIVIGYKASDKTTLTLELNYLRDEVI---------------NAESFSTVGYYSHVFNDHWTFNARAEVFRDMDNYFITGFKEANGGWKSIKGLSTPLITSPGPGTYGDLTLGVTWKPIAGLMLRPEVRYDRSLN-GQFLFAADAILQF 381
41 -13.300PF10677.9; C6XUB1_PEDHD/25-222; Protein of unknown function (DUF2490 topsan)  ali follow..  14.........................NDKWGMHLDVQLRSADEWDGLRNFLFRPGVTYYINKKSNATVGYLLTNTFLDQTGPVGHVLTEQYILMHKIKSVAVQHRFRLEQRFFLRGIIPLTETKETFTKGPFAALQNELFFNVQHKAKLNGKLFDQNRAY--GAIGYRFSKSFDVEAGYLNQFINGASNNTMN....... 198
42 -12.500PF12094.8; G4QGK9_GLANF/10-436; Protein of unknown function (DUF3570 topsan)  ali follow..  14  2.....ALLATATCTLLNAGAQAQETKSENDWKFDTAILYYGETDRVSLLEGVISATKDFGDQHILNTKLV----------------------------------------IDSLTGASATGAVAQPYAQTFSRPSGNGQYTTSPNELPLDDTFRDTRLALSANWTQPIYRDTRINVGGNVSREYDYLSVGANVSAERDF 155
43 -12.500PF11557.8; Q7ME68_VIBVY/1-330; Solitary outer membrane autotransporter beta-barrel domain  ali follow..  4FPFAVSTSVFAIILLPSFALSAQELNDLIVFTVGFHDFDPNENLRKKIGVSTLPFEFALYEKHSLQGRLSALGIEQDVSIVDTSVSD-SHREYVLGAFLEYTNSRQLSENWTFDASIGAHLMYYRSDYTYRSDALAD---KSVIDGYLVNTDAWALVAEPNVQAKYLQMKPWYYWSSAHYFYGQGWGEANWVNGVKMFY 252
44 -11.700PF09694.10; Q1GS13_SPHAL/28-251; Bacterial protein of unknown function (Gcw_chp)  ali follow..  32................VAVQPTLTVSHESGFYAGVWGSSLPDSPAYGKFELDVYGGFEIAPGTTADIGYTYPGSDDGGAPTDYFEGIGKLSHDIGPVSITGMVAYAPKQDSLGDQDNIYLNLGAGFGIPNTPVTLTAGIGYNDGSLGLVSPDGQYVDWSLGASFAAG---PLTFSAQYIDTDVPKTGVPTVVFTLGASF 224
45 -10.300PF13729.6; F7YS53_VIBA7/48-300; F plasmid transfer operon, TraF, protein  ali follow..  93.................................................SLNIFTRGHAEVIARSDIAANTGSSGTDVENRYKNSTVDLIAFGYSEFGLALAKIYNIRGQ-----SFGITPKIQQLRTYKQNVSVKEFDLADYD-----KSETNDNAFNLDLGAVWLI-NDFRVGVAVKDLFAQELKTIQVTISGGYV. 242
46 -10.300PF13609.6; Q2RS83_RHORT/7-331; Gram-negative porin  ali follow..  15  159......................................................ISYFTPKFYGFSAGASYTPQPGGSLVPATKKNRDLAQFGIGYIGVKASATAATQSNFWIYQ-GGLSANYAGFTLGGTYTEIDDESASSGTVYSTAPSSEGR---LWSAGLSYATGP-YSVGFAYAQTNHSGGDNAIYKLGADYKM 305
47 -10.300PF11924.8; D8MX37_ERWBE/123-394; Inverse autotransporter, beta-domain  ali follow..  12  67............LLFNQQGVRVNKERTTLNLGLGLRHY-----SDHFMLGVNSFYDRDITGNVGAEASANKYQRLTDWHQSPLDAMEDYDERPANGFDLAADAWLPFYPQFGASVK---------------------FGKGIVLDNSASPSDLRDSPSAVTTTVNYTPIPLLTFKAGHKS---GSGSDSFVGLDINYRL 241
48 -10.200PF11336.8; Q63N34_BURPS/1-524; Protein of unknown function (DUF3138 topsan)  ali follow..  374............................AEIDYGQQQHAAFNGGRAQWYGLSLLAHRKFNVPV------------------------------LGRMGATLRYDF-LANGKNGGGGGGIALNGNGMDTADGFGIDADCLATSKANGGLGFECKGANRQDVALDLLFYPTQQITVKVEYRHDWANN-SNDLLATQFIYSF 524
49 -9.990PF05275.11; E0TF15_PARBH/59-266; Copper resistance protein B precursor (CopB)  ali follow..  11  48..........................................GEGVDDAEIQALYSRAVAPFWNVQAGVRYDIEPDSLAHGV--------------VALNGLAPYWFEVDASAFSEKGDVTARIEAEYELLLTQRLILQPRIEANLSAQDIPERETGLDAGLRLRYEIRREFAPYVGVEWQSAGEGDDIVFLVGLRTWY 208
50 -9.920PF03797.19; Q32HY9_SHIDS/423-663; Autotransporter beta-domain  ali follow..  27...........LTLGIDSRFSREESSTIRGLFFGYSHSDIGFDHGGDSYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWGNTQILRAEAGTAVSYHMDLQNGTTLEPADSNQVKVNDDGKFNNDVAGTRGVYQAGIRSSFTPTLSGHLSVS.................... 241
51 -9.880PF16386.5; Q89YS3_BACTN/4-75; Domain of unknown function  ali follow..  10  1MKKKLVLFASVAIALASCQTTPKEDYSWIKKGLDVASAQLQLTAEEIDGTGSIRTGYDMD........................................................................................................................................... 64
52 -9.870PF13663.6; B4EJ09_BURCJ/1-57; Domain of unknown function (DUF4148 topsan)  ali follow..  24  1MKSLVVTAAAAILLAAPALSFAQQAKSPVT-SVGYNPARGE.............................................................................................................................................................. 52
53 -9.780PF05420.11; D4Z751_SPHJU/777-1119; Cellulose synthase operon protein C C-terminus (BCSC_C)  ali follow..  147..........VMKSGGGLSLSYDRNGNGVYADGSFYHYDGTAVRDNDSVEINAGGYLRARSGVSVGFNVNYQNYDNNQNYFTYGHGGYFSPQSFLSVNFPIRYWTNDGPSIQASVAPGYQSYDQQTEPGAQGVLDFLKSQNSDVRSSYDSISKTGFGLSASGAISYRVSPNTRLGGELNINTFGEYKEFKTLIGLK... 343
54 -9.330PF16408.5; R6U353_9BACE/1-123; Domain of unknown function (DUF5016 topsan)  ali follow..  12  1MNKILKTMALLAVPATVAVS-CKDDGMDVKFTDKGPEMTIESCATEAFMGDSVRFSIKLNDEFPLS..................................................................................................................................... 65
55 -9.090PF13372.6; Q89MD1_BRADU/82-472; Alginate export  ali follow..  13  230........IRAWAVGARTGYTFANAPWQPRLGVQFDAASGDRRPADGTLG-------TFNPLFPNGYYFTLAGYTGYVNLMHLKPSITVSPADRLKVMAAIGLQWRETTADAIYVQPNVPI------------------------VGTAGKGSNWTGAYGQFRVDYAFNDHLTGAIEAVHFDVGDTIIRAGGHTSNYVG 389

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.