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Query: PF07071.11; Q8ELL9_OCEIH/6-221; KDGP aldolase, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst YNDRICLNVLASDITNAKEIYEATDGHVLIGLLSSNYTSVQEALEDIRVYDKVLDGSISLGLGGGNPEQWKMVADISREYKPRHINQVFPKVGYTRAAVNHAQTMINSLVKPTGQPGLVDIATGPTNKSLIIVEVEAAIQLTKEMGGNSLKFFPMGGTSRLEEYEAVAKACAKEDFYLEPTGGIDVQNSPQIIEIALQAGVKKVIPHVYSSIIDGSLast
1 -110.000PF07071.11; Q8ELL9_OCEIH/6-221; KDGP aldolase  ali  100  1YNDRICLNVLASDITNAKEIYEATDGHVLIGLLSSNYTSVQEALEDIRVYDKVLDGSISLGLGGGNPEQWKMVADISREYKPRHINQVFPKVGYTRAAVNHAQTMINSLVKPTGQPGLVDIATGPTNKSLIIVEVEAAIQLTKEMGGNSLKFFPMGGTSRLEEYEAVAKACAKEDFYLEPTGGIDVQNSPQIIEIALQAGVKKVIPHVYSSIIDGS 216
2 -11.400PF01081.19; ALKH_ECOLI/9-203; KDPG and KHG aldolase  ali follow..  21  16..............KKLEHAVPMAKALVAGGVRVLEVTRTECAVDAIRAIAKEVPEAI---VGAGT------VLNPQQLAEVTEAGAQF-------------------AISPGLTEPLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFC--PTGGISPANYRDYLAL..................... 167
3 -8.920PF00834.19; RPE_SYNY3/6-205; Ribulose-phosphate 3 epimerase family  ali follow..  13  2....VAPSILSADFEEIKAVDEAGADWIHVDVMDGRFPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYEDFAKAGADIISVHVEHN-PHLHRTLCQIRELGKKAGAVLNPSTPLDFL---------EYVLPVCDLILIMSVNPGFGGQSFIP----EVLPKIRALRQMCDERGPWIEVDGGLKPNN----TWQVLEAGANAIV........... 194
4 -7.330PF07189.11; M7P6V6_PNEMU/3-79; Splicing factor 3B subunit 10 (SF3b10)  ali follow..  21  17...........................................................VGTGHADTTKYEWIANQHRDSYASYLGHPFFAVASNDSRERVRLNMIEKMVLPCGLP.................................................................................................... 77
5 -6.920PF01207.17; DUSB_ECOLI/13-321; Dihydrouridine synthase (Dus)  ali follow..  15  1........IAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMPGIRTVQIAGSDPKEMADAARINVESGAQIIDKKVNRKLAGSALLQYPDSILTEVVNAVDVPVTLKIRTG----APEHRNCEEIAQLAEDCGIQALT---IHGRTRACLFNGEAERAVKQKVSIPVIANGDITDPLKARAVLDYTGADALMPWIFREIQH.. 227
6 -6.620PF09089.10; FIB12_BPT4/246-326; Phage short tail fibre protein gp12, middle domain  ali follow..  22  5.........................................................................................................LNGRGSTTSMRGVVKLTTGSQSGGDASSALAWNADVIQQRGGQII-----YGTLRIEDTFTIANGGANITGTVRMTGG................................. 79
7 -6.220PF04476.13; MFNB_METAC/3-229; 4-HFC-P synthase  ali follow..  12  1.........LLVSPINREEAIIASLGGADIGSLGANFPWVIRDV--KEVVNGRQPISATIGDFNYKPGTASLAALGAAVAGADYIKVGLYDIQTEAQALELLTKITLAVKDYDPSKKVVASGYSDYKRINS-ISPLLLPAVAAEAGVDVVMV-STFEFMDEQELKEFTDLAHEHGLENAIAGSLKFEDLPVLERIGPD.................. 201
8 -6.170PF13483.6; B9JRY8_AGRVS/77-244; Beta-lactamase superfamily domain  ali follow..  13  76..................................................................................................................VVGDAYIRNVATDIRSWGGDFEPNGNSIFIFEVAGLCIGHLGHLHHELTDKQFAAI-GRLDVVMVPVDGGLTLGSDSMSRMVKRLRSALILPH......... 168
9 -5.660PF07577.11; TARP_CHLTR/629-685; Domain of Unknown Function (DUF1547 topsan)  ali follow..  19  1.......DILSAVRKHLDVVYPGENGGSTEGPLPAN-QTLGDVISDVENKGSAQDTKLSGNTGAG....................................................................................................................................................... 57
10 -5.630PF00977.21; G8AG50_AZOBR/3-230; Histidine biosynthesis protein  ali follow..  9  31.............ADQARLFESQGFEWLHLVDLNGAFEGKPVNGKAVESILGAVAIPVQLGGGIRDLKTIAHWLEKG-------VSRVILGTVALR-----EPELVREACREFPGKVAVGIDAREGYAETSTIKALDLALKFEDSGVAAIIYTDINGAMGGVNVEATSDLAFHLTTPVIASGGVSSIDDLIALKKEEDTGIEGVI........... 218
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.