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Query: PF07389.12; B6_VACCW/1-97; Protein of unknown function (DUF1500 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .
# Score Template Links and tools%idFirst MSSSVDVDIYDAVRAFLLRHYYNKRFIVYGRSNAILHNIYRLFTRCAVIPFDDIVRTMPNESRVKQWVMDTLNGIMMNERDVSVSVGTGILFMEMFFLast
1 -90.800PF07389.12; B6_VACCW/1-97; Protein of unknown function (DUF1500 topsan)  ali  100  1MSSSVDVDIYDAVRAFLLRHYYNKRFIVYGRSNAILHNIYRLFTRCAVIPFDDIVRTMPNESRVKQWVMDTLNGIMMNERDVSVSVGTGILFMEMFF 97
2 -6.760PF11214.8; G3AIB7_SPAPN/5-109; Mediator complex subunit 2  ali follow..  12  2LQTKLDASLNDILKT-VLNNNKKQSNLLTGPNNQLITPQIIAQLSHQMLKFDDILDETITKFNDARWCIDQMVENKQRQEEMKIR............ 91
3 -6.280PF09322.10; A2Z0V7_ORYSI/496-553; Domain of unknown function (DUF1979 topsan)  ali follow..  18  1MSSKLIFDFY------------------YGEGNVRCGQNGVDLSEFKCMTRGIERAAERSFEAVCNWLIRGFR........................ 55
4 -6.090PF01056.18; G1KK08_ANOCA/11-349; Myc amino-terminal region  ali follow..  15  9PSRTYDYD-YDSVQPYFYFYLSAHNRGCELQPPAPSEDIWKKFELLPTPPLSRGGCYYPSGADQLEMVTELLGSDAVNQSFICDPDDDAFV...... 108
5 -6.070PF15935.5; I5B0B2_9DELT/91-316; RNase LS, bacterial toxin  ali follow..  17  54..............ETTLTQYANQTILLQGRPLYIYNVIKSFINELVVEIESDLYKIDLKPDVVREELESRLFAVYGRFDEKILKVMTPALSLMK.. 139
6 -5.770PF10790.9; Q2K2A6_RHIEC/26-101; Protein of Unknown function (DUF2604 topsan)  ali follow..  13  1.........................IVVNGEPVSVEANVNAPLHTAIAKALEESGNVGQPP---ENWELKDENGTVFDASKKIEDLGGQKLFLS... 69
7 -5.650PF15724.5; L5JX75_PTEAL/24-275; TMEM119 family  ali follow..  13  1..............AHSVPLQAAPLEDMGGDSSASSPSLPPPGTPALSPTSVGPQPTLLAGPKPPTNFLDGIVD-FFRQYVMLIAVVGSLVFLLMFI 87
8 -5.590PF10382.9; G8JV54_ERECY/10-98; Protein of unknown function (DUF2439 topsan)  ali follow..  8  22..............GKLKYFQLTNKFQLFTEGGILLCSEFVTNSRQLGNVLDQEGFGNVEHRIFGSYVVIISDLEREYDNEI............... 89
9 -5.340PF13337.6; R6V945_9CLOT/51-507; Putative ATP-dependent Lon protease  ali follow..  10  212....CELGPRSTGKSHIFKEISPNSILVSGGQTTVANLFYNMGRK-DCVAFDEVAGINFKDKDGIQIMKDYMASGSFARGKEEKSASASMVFV.... 307
10 -5.290PF00014.23; O17644_CAEEL/982-1034; Kunitz/Bovine pancreatic trypsin inhibitor domain  ali follow..  25  11............CNNFEKRYGYDANTYQYGGCEGTLNNF.......................................................... 42
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98.