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Query: PF07902.11; A7J2A9_9CAUD/1-607; gp58-like protein, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSRDPTLTLDESNLTIGSDGRVHYTFTASQDNQKVRLASNCLGTTRFNQVMIERGDKATDYVAPVVVEGSGESTGVFKSLEEMLSGLQSINLELTDTKNSNLWSKIKLTTNGMLREYHRDHIKTEIVESADGIAKRIADDTGQKLALINETIKGIKREYQDADRQLSASYQAGIDGLKTQLANDKIGLQAEIKLSAQGLSQKYDDELRKLYAKITTTSSGTTEAYENKLEGLRAEFTRSNQGMRTELESQISGLRSVQQSTAKQISQEIRDRTGAVSRVQQDLASYQRRLQDAEKNYSSLTQTVKGLQSTVSDPSGKIQSRFTQLQNQIDQRVTRDDVMSIINLSGDSIKLAIQKAGGIDAKMSAKEIISAINLNGYGVRISGERIALDGNTTVNGAFGAKLGEFIKLKADQIIGGTIDAAKIRVINLNASSIVGLDANFIRAKIEHTITSLLEGKVIRARNGAMMIDLSNSKIDFNSNATINFNNKDNALVRKDGTHTAFVHFSNATPKNYTSSALYASIGITSSGDGINSASSGRFCGARFFRYARGYEHTALVDQAEIYGDDIVFSDDFNIDRGFKMRPSLMPKMVDLNKMYQAILALGPLLVTLast
1 -137.000PF07902.11; A7J2A9_9CAUD/1-607; gp58-like protein  ali  100  1MSRDPTLTLDESNLTIGSDGRVHYTFTASQDNQKVRLASNCLGTTRFNQVMIERGDKATDYVAPVVVEGSGESTGVFKSLEEMLSGLQSINLELTDTKNSNLWSKIKLTTNGMLREYHRDHIKTEIVESADGIAKRIADDTGQKLALINETIKGIKREYQDADRQLSASYQAGIDGLKTQLANDKIGLQAEIKLSAQGLSQKYDDELRKLYAKITTTSSGTTEAYENKLEGLRAEFTRSNQGMRTELESQISGLRSVQQSTAKQISQEIRDRTGAVSRVQQDLASYQRRLQDAEKNYSSLTQTVKGLQSTVSDPSGKIQSRFTQLQNQIDQRVTRDDVMSIINLSGDSIKLAIQKAGGIDAKMSAKEIISAINLNGYGVRISGERIALDGNTTVNGAFGAKLGEFIKLKADQIIGGTIDAAKIRVINLNASSIVGLDANFIRAKIEHTITSLLEGKVIRARNGAMMIDLSNSKIDFNSNATINFNNKDNALVRKDGTHTAFVHFSNATPKNYTSSALYASIGITSSGDGINSASSGRFCGARFFRYARGYEHTALVDQAEIYGDDIVFSDDFNIDRGFKMRPSLMPKMVDLNKMYQAILALGPLLVT 607
2 -14.700PF01442.18; L9KQJ6_TUPCH/68-256; Apolipoprotein A1/A4/E domain  ali follow..  1.......................................................................KLVDNWDTLGSTFQKVHEHLGPVAQEFWEKLEKETE-------------ELRREINKDLEDVRQKTQPFLDEIQKKWQEDLERYRQKVEPLSAQLREGARQKLMELQEQVTPLGEDLRDSVRAYADTLRTQLAPYSEQMRKTLGARLEAIKEGGSASLAEYHAKASEQLSALGEKAKPVLEDIHQGLMPMWESFKTGVLNV............................................................................................................................................................................................................................................................................................................................................... 188
3 -12.100PF15450.6; G1PIP2_MYOLU/56-586; Coiled-coil domain-containing protein 154  ali follow..  96..................................................ALDK-VEVREALTQIRKQQALQDSERKGTKQEANLRLTKLARKLEQEEQNREVACSALQRSQEEASQKVDQEVARLQAQVTKLGEEMSLRFLKREAKLCGFLQKSFLALEKRMKTSESTRLKVESSLREELESRWRNLQELAEERLQALRGQCKVGSSGWAQEESYLLEQC-RGLDRAVVQLTKFVRQNQVSLNRVLLAEQKAQDTKGHLEESQAGELAAYLQENMEAMQLASEQARQETQSTLELLQEKRQALEGSVAELVTQVGDLNDHFLALSWRLDLQTLTQKLCEAKSEREGAERRSMEGLAWCRKEAQARETVDSLPRQIEAVSDRCVLHKSDSDLKISAEGKAREFEVEAMRQE.................................................................................................................................................................................................... 463
4 -11.500PF10174.9; H2T771_TAKRU/113-856; RIM-binding protein of the cytomatrix active zone  ali follow..  10  109..............................................FLRLQSDHERQAKE-LRKTMEEMETRIDSQKQTLDARDESIQRLLELLQGQGQGTWSRGHRAGIITMAAQEAEAHQENMHVREELQRRTQPQAEPAK-TRALQAVIDMKDTKISSLERNI-RDLEDEVQMLKTSGLLQPDDRQDELKEVYKSHSKFMKMKIEQLKQELNKKESEMQALQTETLTNQNSDCKQHIDVLKESFSAKEQRA-NTLQTEVDALRVRLEEKEQFLTKKTKQLQDLTDEKSTLTGEIRDLKDMLDVKERKVNVLQKKIENLLEQLK---DKDKQLAGLRERVQGFQTDSSNTDTALATLEEALSEKE-IENLREQKER-QMRKENQELKDKTALQPPKELKEFSLVDLMCS.................................................................................................................................................................................................... 484
5 -11.100PF12128.8; Q8EAA0_SHEON/8-1195; Protein of unknown function (DUF3584 topsan)  ali follow..  556IAPE---LLHRTDLHPSVTGESDTVFGVNLDLKAIDVPEYAASEQELRI-RLSKAEEALQSAQELQAEAESQLVAINGELDKLSRELTFARTAYKNSRDDLRRLFDEKRSEQDKINKALAERKAFAQQRLTQLDGELKQLKHQHQLEQKEQALEARMEKQAYWQEVIGALDNQLGQIKATIDARRESAKAEQKACETWYKNELKSR------------EDNILKLKQQIRELETKISRA-EQRRSEVLRFDDWYQHTWLIRKPKLQTQLSDVKRAASEIDQQLKAKTQEVKTRRQQLETERKASDAAQIEASENLTKLRAVMRKLAE-LKLPANNEEAQGSLGERLRQGEDLLLKRDYLMGSVKQEHFDSVIASKSGS..................................................................................................................................................................................................................................... 923
6 -10.800PF06705.11; E2RTU7_GIAIC/25-271; SF-assemblin/beta giardin  ali follow..  10  1.........................................................................TETAVKLSNMNQRVSRFHDKMEN----------EIEVRRVDDDTRVKMIKDAIAHLDRLIQTESRKRQ--------ASFEDIREEVKKSADNMYLTIKEEIDTMAANFRKSLAEMGDTLNNVETNLQNQIAI--------HNDAIAALRKEALKSLNDLETGIATENAERKKMYDQLNEKVAEGFARISAAIEKETIARERAVSAATTEALTNTKLVEKCVNEQLEVASEIRAIQEEIDREKAERKEAEDKIVNTLEDVVSKIQ.............................................................................................................................................................................................................................................................................. 239
7 -9.670PF04163.12; KAR5_SCHPO/1-544; Tht1-like nuclear fusion protein  ali follow..  123..................................................KLESTST---WLS---TSHFHDVNHLKELSIEVNMNVTLVQKQFLEMVILHLRNFESVTDK---MNQRIDKFDGKFNSVIENSFKDINFRVNQEIMGLVELQNHQQEGMVQQKE-----ILSTIKQLKSEIFDINSFFANFIEESAGYSNSLIEKLNEKFTSENAIALSAIGKYTSEFSAFMEKRIKNLITTTEDSLQQSVQSNIDFVNSGFQPLYDLTIQLKEELQSLKRLSSEQQNLQHEQILQWKSDFLNVSKDHLKVLQQLRPLIDIVEKFMNVYFKGLSN................................................................................................................................................................................................................................................................................ 404
8 -9.530PF06160.12; R7G8R1_9FIRM/22-573; Septation ring formation regulator, EzrA  ali follow..  89..............................................IYGHKVKAARRRLNELSDDLALCETDVNKIHTVLDDILEQENEQRVHINALKETFRKVKKTIHENRTAYSQSYEYLETEIIAIEKMFSKFEEWMFASEFNKAADQQKEIKESITRLNEIVEARAKGILPRAIDEVGYNYARAKNKVSKNLDVISDMLKNDLNRLHSGTPENVKEDLDDLEVRIAQLAEQIRLEEEAFDTALFDSIREVNCEFDDIKSLYAQRLQDTQTRLDVLNDMQRRLDKIVLDKQVPYTTILIAYKELAQSNAGFSKEVELMKEKLNNACSDEERAKKQLIKLQLIINEIRVKMLKHRLPNVSAQYEKDLCKGEDMMHDVILEHSPLDVTQLNAKLREAIDFIYTLYNNVNNLVGMAIMVENTIVFGN.................................................................................................................................................................................... 503
9 -9.310PF06933.11; O44418_CHIPA/1-756; Special lobe-specific silk protein SSP160  ali follow..  1............................................MNIKVILVCALVAIFFAQVAEGGPIANFVGFVISLLFSLFEVMVSVVFDVK-------------SFTSLSTPTCNSTVPSFATRVGGGRFSGIITASFNMIAMISANVQAIQSGSGSTSGSSSSSTTSTSNSTTTTSNSTTTTTNSTTSSNSTSSGLTSSASVVSLIDTIAWVYQDSSVGIAYLMVSILALFYGQSVSAPPYPDLGIPALPANCSGPGVPQSVQIRAAIAYVNITIYFINMTGQQFEDLQGPVATDCGCPNT-----TSVAPLVLEWEAILAALQALANSTASANSTTSSNSTTTTTTNSTSTTTTNSTTTTNSTSSSNSSTIAGCIDISANFTIALQSLQALLLQESTCAPALAANAKKSGVRDMSPCKPGKTASGCAKSGE.......................................................................................................................................................................... 375
10 -9.220PF03148.14; G3VSY1_SARHA/16-397; Tektin family  ali follow..  11  51..................................................RIDSVERWKETLDRCLADLDTEIDALTQMKEVAERALQAKNLPMDVAIEC-----LTLRESRRDIDLVKDSVEDELHKEVEVI-DCAKEALQQKIREIFEQLCLLQEARQQLNFDHRDKMEAEIDRACLSLNVHSPNLSLKVNPTRIPNGSCTIQQ------------DDFSQYNKEQAEAERKASADLREATALTIAETNNELEAQRVATEFAFRKRMREIEKALNGLKWQEKSTLGETVDFEEDIRQVEEDLSIKMRNMKLAHTRLDIRTYRPNMELSRDQVQYGLTNEVHQLEANIATLKQKLTQAQFYKHLARIQADIACKTNSLMLDSKCLDI........................................................................................................................................................................................................................... 377
11 -9.170PF05622.12; H2QW41_PANTR/12-710; HOOK protein  ali follow..  281LADEAQSLKDEIDVLRHSSDKVS---KLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKE-KDRLRTERDSLKETIEELRCVQAQQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKLNQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLE-VQSQVEELQKSLQDQ--GSKAEDSVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIR-TLDPKQNQGAAPEIQALKNQLQERDRLFHSLEKEYEKTKSQREMEEKYIVSA................................................................................................................................................................................................................................ 657
12 -9.050PF15070.6; W5MC41_LEPOC/402-1036; Putative golgin subfamily A member 2-like protein 5  ali follow..  10  6..............................................VQQLKTERDQYAAQL-KDRTEQLLSQVNSLSEEKERSMTQIQELENLVIELRNASALLSQEREDQAAPEPTGPSENETALQEALGKLQQEKDDLSTQYQAQVRDN-EQLSRLCQEQEERLL-ELERTVQRFSEDAVD-RQQILESMQSDKATISRALAQ---------NRELKEQLAELQNGFVKLTNENMELMSALQSEVKKELAKKMGQMQEELHQSREELEGKTQEARSLLEQRDQYLAHLQQYTAGYQQLVAEREELHKQYLHQVQLMDRQHEEVQGKVQLELSQKELERAKEKLTQLAKDNESLKTEVKELTGLGT................................................................................................................................................................................................................................................ 323

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 1 8 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.