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Query: PF07959.12; W4YPG4_STRPU/114-532; L-fucokinase, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst AGGYSQRLPSASLLGKIFTAVPYGRPIYQMLELILAMYIDLPAHMPSGGIFLACSDVIILYDCTVGVEWSFDKPGITAFGHPAPIAVGTTHGVFLYKDTPNVCSQVHIVECEEFLHKRSEDVLREKGVLLPQPCQQTLGISEDHVLVDSGYFMDGETAKKMIEFYEEKSPLSCEIDSHGDFLHGLGNCGNNSYINDMSNVSSKTDKLLSMRQEVFKLLQGTPLHVLVLPYSKFYHIGTTEELLSHFCDNCSLRRELSLTKDAFNRSVDLGDSNTVLDKCATREACIMDSIVPQGMDTSKPCIVEYCHFKSPCHLGERCIVSNCVVQAPSSGCPVSIPSFTFLHTAAVKTREGSTLYVTIFFDIRDNLKRSAPHLEEAGQLSFLNQSLQVLFNNFNSTSLQAIFPPGTTTFSIWNAKLFPLast
1 -138.000PF07959.12; W4YPG4_STRPU/114-532; L-fucokinase  ali  100  1AGGYSQRLPSASLLGKIFTAVPYGRPIYQMLELILAMYIDLPAHMPSGGIFLACSDVIILYDCTVGVEWSFDKPGITAFGHPAPIAVGTTHGVFLYKDTPNVCSQVHIVECEEFLHKRSEDVLREKGVLLPQPCQQTLGISEDHVLVDSGYFMDGETAKKMIEFYEEKSPLSCEIDSHGDFLHGLGNCGNNSYINDMSNVSSKTDKLLSMRQEVFKLLQGTPLHVLVLPYSKFYHIGTTEELLSHFCDNCSLRRELSLTKDAFNRSVDLGDSNTVLDKCATREACIMDSIVPQGMDTSKPCIVEYCHFKSPCHLGERCIVSNCVVQAPSSGCPVSIPSFTFLHTAAVKTREGSTLYVTIFFDIRDNLKRSAPHLEEAGQLSFLNQSLQVLFNNFNSTSLQAIFPPGTTTFSIWNAKLFP 419
2 -17.700PF00483.23; GLGC_SYNY3/15-285; Nucleotidyl transferase  ali follow..  13  6GGGAGTRLPLTKLRAKPAVPLKDNPDWFQGTADAVRQYLWLFREWDVDEYLILSGDHLYRMDYAQFVKRHRETADITLSVVPVDDRKAPELGLMKIDAQGRITD---------FSEKPQGEALRAMQVDTSVLGLSAEKAKLNPYIASMGIYVFKKEVLHNL-----LEKYEGATDFGKEIIPDSASDHNDDYWEDIGTIEAFYEANLALTKQ.............................................................................................................................................................................................................. 271
3 -5.550PF16314.5; Q5LHM9_BACFN/5-659; Domain of unknown function (DUF4954 topsan)  ali follow..  8  2................................................................................................................RRLTEDEVLQLKSQSCLADDWNKVAVAEEFTTEFVHHTRFSGEVKLGVFHSDFILPGGIKKHSGLRHVTLHNV--LVDGLTQFGNGVETAVLNETGGREVLINDKLSAHQAYILALYRHRPELISRMKEITDYYSNKHASAVGTIGNHVMILNTGSIKNVRIGDFCRICGTCRLYNGSISAPVHIGHGVICDDFIISSGSHVDDGAMLTRCFVGQACQGHNYSASDSLFFSNCQGENGEACAIFA.............................................................. 281
4 -5.000PF16511.5; C3ZGA4_BRAFL/4-85; N-terminal or F0 domain of Talin-head FERM  ali follow..  17  5.................................................ISVKHANVVKTMQFEPSTIVYDACRMIRERIPEAQMGNATEFGMFLADEDPKKGVWLEAGRTLDYYLLRSGDLLE....................................................................................................................................................................................................................................................................................................... 79
5 -4.840PF02545.14; D7DNK7_METV0/10-194; Maf-like protein  ali follow..  14  4ASRSPRRVELLSQLGVACEPLPADIDETQFAGESPEKYVTRLAREKAQACPVLAADTTVVLDGIVLGKPDDDIDARNMLIALSGSLHEVHTAVALAFNNQIDVVLSTTVVEMMTLTEEQIERYITSG.................................................................................................................................................................................................................................................................................................... 141
6 -4.250PF10929.8; K9VX85_9CYAN/6-70; Protein of unknown function (DUF2811 topsan)  ali follow..  10  10..........................................................................................................................................................................................................................................................................................................................................................................LHESLKGYLDTHPNWDQDRVFAAALSLFLLQNGNGKTTEVSQNYRACARVYLETLF. 65
7 -4.230PF18425.1; R5HHB3_9FIRM/6-103; Csp protease B prodomain  ali follow..  11  1..............GKIENILNLADATREEREKSLNLDVGYDVADDSWEVIVKFFGTTEELRQKLSERFPEEQAQIGI------YNLTNEYAILRIPQP-LVELVASMPEI-EYMEKPK............................................................................................................................................................................................................................................................................................................ 98
8 -4.210PF15635.6; Q4KCC7_PSEF5/221-326; GHH signature containing HNH/Endo VII superfamily nuclease toxin 2  ali follow..  8  28.....................................................................EYSKDTAPCMCVEGWGNTHGSHGVRHSEHKALGVIAGVKKGDMREFGKEASMAAQSTRGAFPESNCSERCLTAQL................................................................................................................................................................................................................................................................................... 102
9 -4.190PF00132.24; LPXD_BRUA2/240-275; Bacterial transferase hexapeptide (six repeats)  ali follow..  10  1.....................................................................................................................................................................................................................................................................................................DTVIGEGTKIDNVQIAHNVRIGRFCLVAA................................................................................................. 30
10 -4.160PF18127.1; A0A0J5SBD3_9LACT/4-99; Domain of unknown function (DUF5598 topsan)  ali follow..  10  4..................................................................................................................................................................................................................................................................................................................................LATDAYKLTHHLQYPQNIDKLYSYGEARIGGKYPTVSWFGLSMILHDYFQTPVTDEMIDEAERVSEETFGTKEYFNREVW-------EKVRDLGYFP 93
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24