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Query: PF08007.12; Q9CP87_PASMU/26-337; Cupin superfamily protein, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst PEIFLRDYWQKKPLLIRNGLPEIVGMFEPDDIIELAQQEDVTSRLIKQFSEDNWQLARSPLTAKDFKNLPAQWSVLVQNLEQWSPELGQLWHAFGFIPQWQRDDIMVSYAPAGGSVGRHYDEYDVFLVQGYGHRRWQLGKWCDPSTEFKANQPIRIFDDMGELILDEVMAPGDILYVPSRLSHYGVAQDDCLTFSFGLRYPNVADLFDNINKGMCQALPEIDLTELNIPLRLSPATQATGKLDPVMVENMKQQFFAKLANSAQFDRLFQHAVATTVSSRRYELLETEGYCDLDEVRSILAENGTIVQDNNCKLast
1 -106.000PF08007.12; Q9CP87_PASMU/26-337; Cupin superfamily protein  ali  100  1PEIFLRDYWQKKPLLIRNGLPEIVGMFEPDDIIELAQQEDVTSRLIKQFSEDNWQLARSPLTAKDFKNLPAQWSVLVQNLEQWSPELGQLWHAFGFIPQWQRDDIMVSYAPAGGSVGRHYDEYDVFLVQGYGHRRWQLGKWCDPSTEFKANQPIRIFDDMGELILDEVMAPGDILYVPSRLSHYGVAQDDCLTFSFGLRYPNVADLFDNINKGMCQALPEIDLTELNIPLRLSPATQATGKLDPVMVENMKQQFFAKLANSAQFDRLFQHAVATTVSSRRYELLETEGYCDLDEVRSILAENGTIVQDNNCK 312
2 -20.100PF13621.6; Q57VR2_TRYB2/51-453; Cupin-like domain  ali follow..  13  57GEINENDSFHEEEIVTESDAEDSKNGNNEAESQGTLGPRRVTVALLYRLLRANPLVPPLKSQFVDLRRPQRSIAYAQMQNNCLAEEYQHLHADITRVFGGKREAANIWLGTPASVSSMHQDWVENLYAVVRGVKEFILVPPWEGVFVPKPELPAAAFTLKAAANLIAYVQPGEVLYLPALWLHRVAQHADSEDSRV.................................................................................................................... 364
3 -19.100PF06052.12; 3HAO_YEAST/1-155; 3-hydroxyanthranilic acid dioxygenase  ali follow..  14  7............................................................................INIDKWLKENEGLLKPPVNNYCLHKGGFTVMIVGGPNERTGYHINPTPEWFYQKKGSMLLKVVDETDAE----------------PKFIDIIINEGDSYLLPGNVPHSPVRFADTVGIVVE-RPGGENDKIRWYCSHCRQVVHESELQMLDLGTQVKEAILD.......................................................................... 153
4 -15.300PF02041.16; ABP1_ARATH/33-198; Auxin binding protein  ali follow..  10  45.......................................................................................................EIWLQTFAPGSETPIHRHSCEEVFVVLKGSGTLYLAETHGNFPGKPI---------------EFPIFANSTIHIPINDAHQVKNTGHEDLQVLVIISRPPIKIF......................................................................................................... 133
5 -14.500PF06560.11; Q8ZMP7_SALTY/31-215; Glucose-6-phosphate isomerase (GPI)  ali follow..  12  4...........................SAGQMAVVLPEFTEGLR-----------------NEPAYDVYRG----LSFAEDQERLAADQYQYDITIIMPGTIGKERKKTSGHYHGYNDTRTHPEVYEV-IKGTAAYILQKS--------PDFAAAPQELVVDDLIVAVVKEGQSIIVPPNYGHCSINIGDGPLVFSNLAYKPCTVHYDTVQFY................................................................................................... 161
6 -14.000PF03079.14; MTND1_ORYSJ/14-168; ARD/ARD` family  ali follow..  10  1.........................................EAWYMDDSEEDQRLPHHREPKEFIHVDKLTELGVISWRLNPDNWENCENLKRIREARGYSYVDICDVCPEKLPNYEEHLHTDEEIRYCLEGSGYFDVRDQNDQ-------------------WIRIALKKGGMIVLPAGMYHRFTLDTDNYIKAMRL.................................................................................................................. 146
7 -13.100PF06339.12; ECTC_HAHCH/1-127; Ectoine synthase  ali follow..  11  36.......................................................................................................SFHITTLYANKETPIHYQNHLESVYCISGEGEVETVADGEVHA----------------------IKPGTLYVLDKHDKHLLRAFSEMTVACVFNPPLNGKE........................................................................................................... 115
8 -12.300PF07385.12; M1WKI9_PSEP2/1-220; D-lyxose isomerase  ali follow..  11  84.....................................................................................................AEKIMIVRESQICPMHFHWSKTEDIIN-RGGGNLVIELYGSTPDEELSTEPMTVMIDGMPAPGGTVTLEPGESIFLEQGMYHRFYGEGKVLVGEVSSVNDDNADNRFHEPQARFPRIEEDEQPLHLLCTDY................................................................................ 219
9 -12.000PF00190.22; CRU4_ARATH/283-432; Cupin  ali follow..  15  36.......................................................................................................NALRGYLYSGGMVLPQWTNAHTVLYVTGGQAKIQVVDDN------------------GQSVFNEQVGQGQIIVIPQGFAVSKTAGETGFEWISFKTNDNAYINTLSGQTSYLRAVPVDVIKAS...................................................................................... 141
10 -11.400PF07883.11; Q8YKH8_NOSS1/40-113; Cupin domain  ali follow..  15  2.........................................................................................................IEILQPGSRSSLKHHSAEDEMVYVLEGEITLIEGDA------------------------ETILRPGDAATFQAGVGHFNRSAKATRCLVVG................................................................................................................... 74
11 -11.200PF06249.12; Q8Y7T4_LISMO/4-147; Ethanolamine utilisation protein EutQ  ali follow..  9  1..........................ISKELIEQLVKQEKMGQSSKHVDPSGILSVKLPVVKVSEEDRLDTGNP----------SDVVYTKDLVTLEESKRLGFGLMEMKDTT--FDWFLDYDEVDYV-IEGRLDVVIDGR------------------------TVSAGPGEIIFIPKGSQIKFSVTGEARFIYV.................................................................................................................... 136
12 -11.100PF11699.8; A0A0D1E8Y7_USTMA/609-694; Mif2/CENP-C like  ali follow..  16  18.........................................................................................................LHLPPGASKPTKSAKDNSFVFCV-LQGALRASVHRK------------------------SFIIGPKGVFQVPAGNTYSLENICQR......................................................................................................................... 78
13 -10.900PF02311.19; Q8KJH7_RHILI/35-171; AraC-like ligand binding domain  ali follow..  11  3......................................................................................................GLDYLAADYHRQDFSKHI--HNEYLIGLRGVHDVWCRGE------------------------VWHAGSGTVATFAPGEPHFGGAGDDLGWSQKIFYMPE--GLVRQVLEDSSQTEPGTIDFKSPF-------------QENAPVAHGLSAFWRLLEHEHSSALEIEEHLIRFL.................................... 137
14 -10.800PF05721.13; Q92PC6_RHIME/55-292; Phytanoyl-CoA dioxygenase (PhyH)  ali follow..  11  18.AEICEALATGPGVAV------FKRAFTDTRVIDEASGNEIIEEQHRTNSGGGDHFAKPGANDRIWNSLEKHCLKNPENFAAYYAIIALVSEAW----NYQMTAQVNRVNPGGASQSPHRDYH-AVAHCLPYSQTYLPGYLALKRPEFRTYFE--------ENHVQLPLEKGDVVFFNPALFHAAGSNRSAGIKRV.................................................................................................................... 238
15 -10.700PF16867.5; G8MI78_9BURK/28-189; Dimethlysulfonioproprionate lyase  ali follow..  11  99..........................................................................................................FSLMLPHTRYPDHSHPPEEAYVLFTPGEFRQNGGE------------------------WIDPGMGGGIHNVRNNPHAMRSASAPF........................................................................................................................ 160
16 -9.880PF13759.6; Q1GR96_SPHAL/97-197; Putative 2OG-Fe(II) oxygenase  ali follow..  11  1........................................................................................................SLWVNILKPGGTSGHIHPHSTFYVAVPPGSGALKLEDPRLPMLMAAPGRTDDAPEYLRPFVYAEPAAGRVFLWESWLRHEVMPAGKGERISISFN................................................................................................................. 101
17 -9.530PF14499.6; F0SG47_RUBBR/50-300; Domain of unknown function (DUF4437 topsan)  ali follow..  12  160..........................................................................................LTFLWGQPDGKEAVGTMLKLPASFQGQLSTLSSSLRVVVVQGE----------------------LDLQVDDNGMAKTLPTGSYFGANGPSEHCLSSEDECV---IYVRVKGKYSL.......................................................................................................... 250
18 -9.370PF09313.11; A6VQ19_ACTSZ/9-89; Domain of unknown function (DUF1971 topsan)  ali follow..  12  16...................................................................................................................QEKHNTKSGTWITVLKGQLKFYVLA-----------------ENGEVISDHLFTPANDTPFVEPQVWHRVEAASDDLECYL.................................................................................................................... 81
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.