Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: PF08347.11; H2RR76_TAKRU/1-251; N-terminal CTNNB1 binding, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250
# Score Template Links and tools%idFirst MPQLNGGGGDDLGANDEMISFKDEGEQEEKISENVSAERDLDDVKSSLVNESESSSDSEQAERRPQTRADSESYDKARDYFSEALRRQQDGGFFKSPHYPGYPFLMIPDLTNPYLPNGSLSPSARTACISIQSVEGKCKCFCNYRQYLQMKWPLLDVPGSAGLKDSRSPTPGHLQSNKVPVVQHAHHVHPLTPLITYSNEHFSPGTPPSHLSPEILDPKTGIPRTPHPSELSPYYPLSPGAVGSIAHPLGWLast
1 -82.300PF08347.11; H2RR76_TAKRU/1-251; N-terminal CTNNB1 binding  ali  100  1MPQLNGGGGDDLGANDEMISFKDEGEQEEKISENVSAERDLDDVKSSLVNESESSSDSEQAERRPQTRADSESYDKARDYFSEALRRQQDGGFFKSPHYPGYPFLMIPDLTNPYLPNGSLSPSARTACISIQSVEGKCKCFCNYRQYLQMKWPLLDVPGSAGLKDSRSPTPGHLQSNKVPVVQHAHHVHPLTPLITYSNEHFSPGTPPSHLSPEILDPKTGIPRTPHPSELSPYYPLSPGAVGSIAHPLGW 251
2 -9.140PF10477.9; B4NHI2_DROWI/10-831; Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E  ali follow..  11  365.PEWFSAGPTSQLETIDLHGFDDLENSNESRTSESKKDRACNALPVDTDKQIDHETMSKNSSSVSLNLLETKTGDDVKDVDMNTLEAVNF................................................................................................................................................................. 453
3 -8.360PF07229.12; VIRE2_AGRFC/1-556; VirE2  ali follow..  15  1MPKAEGNGENETAAGNETSDFVN--KRQKREGVNSTGMSEIDMTGSQETPEHNMHGSPTHTDDLGPRLDADMLDSQSSHVSSSA....................................................................................................................................................................... 87
4 -7.600PF06524.12; B7QNY2_IXOSC/1-301; NOA36 protein  ali follow..  23  260YGSGGGGGDLDDEDEDDDEDDDDDDDDEDEESDEDESS----DEKE............................................................................................................................................................................................................. 301
5 -7.460PF12097.8; Q5NIP1_FRATT/1-374; Protein of unknown function (DUF3573 topsan)  ali follow..  15  19.PFMGFSNS-----------FKNSNEQSQKS--NSIDKQGITQLQSQIANQAEINHLTQIKNSNNSAQFATYSSKVENIGLPNSLPDNNK................................................................................................................................................................. 95
6 -6.980PF06284.11; UL84_HCMVM/1-586; Cytomegalovirus UL84 protein  ali follow..  17  1MPRVD-GGGGGVGSNSS----RHSGK---RRQRRALSTPPLTTTTTTMMGVASTDDDSLLLKTPDELDKHSGSPQT............................................................................................................................................................................... 87
7 -6.710PF15369.6; M3XPT4_MUSPF/28-351; Uncharacterised protein KIAA1328  ali follow..  22  1..........DLCLEDKIKELARVSEEKEVTEERFRAEQELEEQNDLIIKEREALQLQ................................................................................................................................................................................................. 62
8 -6.510PF07794.11; Q9ZQ10_ARATH/1-790; Protein of unknown function (DUF1633 topsan)  ali follow..  12  1MPHLTAQ-GEEISTISKIVVFSDLDDSQNKSNHSYGDDDSSSKMRSAVITSTRVDKPKKKKAPKQKGSLPMTNND................................................................................................................................................................................ 123
9 -6.360PF05518.11; CAPSD_HV19S/10-772; Totivirus coat protein  ali follow..  14  473LAHWLGHPENGLGADPNAVLHPGPCEGNEQVRDRVEADLPLTDYQSPFPAAGEHEMADTTVTMTVGRPIGIAPGRSNAGDNQARRARTRASVELSAASRRARVFGRPDVGEMPTLTSAPAPIPASPAYDGNRGGEAGGVTGRGNNRSAAPGHASWSERQADGVPVNVTPHHNALRAPPFPRQQGALGGGGNVPLPPAPGAAPPPPPGPPNGPPA--GPPPSDDGSSNPAAPVPTAIHAPPAAAQADRAEG. 762
10 -6.280PF15782.5; H2M7V5_ORYLA/1-1933; Gene regulated by oestrogen in breast cancer  ali follow..  11  137LPDERGRSGNCMGCGEKGFRYFTEFSNH-KLSTQPKKQKHL---KYHLYRNKQGILVKGAPICWRVNVINAGCGSCCSVSSSSFSLLLCCSPISFAPSATVMKRSDTGRIGAKEIGMAGPHVDQQTTDLAHTLINGNHSAPSSAQSSLNQPGRSSAPATHTNAGPPKKRHKGWSPDLSANSLQESTVKSPPASLSLSTLSVSSVVTPSAAIFPPLQLSVTVPDQLLHTCRLQPVILKGHGPLPQLTGNVR. 391
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;