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Query: PF08560.10; G0NUG4_CAEBE/10-151; Protein of unknown function (DUF1757 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140
# Score Template Links and tools%idFirst YTADVVQEKLDPEIPRPVWEYGIHITIRSAQCGTFIGSMLGPMALLLTQKEKNRQNIMNSFVMGGQAGAVIGTALGPVLTCMKLRGLCDLILYGKCYSLRFDEDALRRDRAAVFSAAAGYLSSGAPGFVIGLDVSFLFSKLVLast
1 -82.200PF08560.10; G0NUG4_CAEBE/10-151; Protein of unknown function (DUF1757 topsan)  ali  100  1YTADVVQEKLDPEIPRPVWEYGIHITIRSAQCGTFIGSMLGPMALLLTQKEKNRQNIMNSFVMGGQAGAVIGTALGPVLTCMKLRGLCDLILYGKCYSLRFDEDALRRDRAAVFSAAAGYLSSGAPGFVIGLDVSFLFSKLV 142
2 -7.710PF02466.19; TIM22_CRYNJ/52-172; Tim17/Tim22/Tim23/Pmp24 family  ali follow..  9  5.........................VTIAGVGGLAIGGFFSLMSATFAYEDPLSRASNKLTTTRAQTMFVFKEMGRNMWSSGRGFAKVGMVYSGVECCIEGYRAKNDIYNGVSAGFLTGAILARNAGPTAMLGGGVAFAAF. 120
3 -7.550PF04087.14; W6FS75_NODSP/62-207; Domain of unknown function (DUF389 topsan)  ali follow..  10  2..................................LISPLMGGILANGLALAAGDVILAMRSLLNLLLSCLVAISFAVLLVTLLPFKEITSEILARTRPNILD--------IALFSGAVGSVARGVATSIPGVAIAVAL.... 104
4 -7.210PF01864.17; CDPAS_METJA/2-177; CDP-archaeol synthase  ali follow..  15  36............NFIDGRRLIGNGVTYRGCIFGILCGTLVGLIQGILVDFNIFNSLDFYGTVLDH-------VILAFFLSVGAIVGDAVGSFIKRRLNIERGKPAPLLDQLDFVIGALAFGYIVAPIPYEMIIIICLFTVFV 158
5 -6.960PF12920.7; D3V1J2_XENBS/1162-1830; TcdA/TcdB pore forming domain  ali follow..  14  131.................ETALRVHTYVNLAQMAHGMLEDGAKLASLYRVVASEGRGVTSSLFSSTGVGAGLNIFSVALDGIELAHAQNESQKAVYGTQLAFDSAGLVTTGVGIGAGIFGAFASSLAVPLAGLGIGFTA.... 261
6 -6.890PF17690.1; CH089_HUMAN/1-160; Family of unknown function (DUF5537 topsan)  ali follow..  11  98...............................................TKETCSVAPLWEKSKGSGFSDPLTGAPSQYLERLSKIAILEYDTIQETTTKSKKSKKRDLRD................................. 160
7 -6.860PF03035.14; Q917X0_9CALI/1-251; Calicivirus putative RNA polymerase/capsid protein  ali follow..  10  1................................................................................................................MAGAFIAGLAGDVLSNGLGSLINAGANAIN 30
8 -6.750PF02535.22; ZIP1_ARATH/48-352; ZIP Zinc transporter  ali follow..  12  161....................IVVHSVIIGISLGA----------------SQSIDTIKPLMAALSFHQFFEGLGLGGCISLADMKSKSTVLM---FFSVT-----------APLGIGIGLGMSSVEGMLNAASAGILIYMSL 267
9 -6.610PF04306.13; A8ZXM9_DESOH/22-159; Protein of unknown function (DUF456 topsan)  ali follow..  12  68...............................................................................................................SAGGMLIGLFIFPPFGIFLGAVAGAVIGEMV 98
10 -6.510PF16082.5; D0IZ12_COMT2/1-76; Bacteriophage holin family, superfamily II-like  ali follow..  16  19..............................................................................................................GGAIVSFFGWVASSNAIGILGLAVAIIGALV. 49
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.