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current user: public |
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Query: PF08738.10; E7LW60_YEASV/4-110; Gon7 family, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . | |||||||
# | Score | Template | Links and tools | %id | First | PVAQYSAPDGVEKSFAPIRDDPRYMTTEGRTTGPSDHVLNAGQIDRDKPSEPERTKDGSQLTYLGQLRTQLTGLQDDINEFLTGRMELAKNKKKAGADEKRIQEEIN | Last |
1 | -61.100 | PF08738.10; E7LW60_YEASV/4-110; Gon7 family | ali | 100 | 1 | PVAQYSAPDGVEKSFAPIRDDPRYMTTEGRTTGPSDHVLNAGQIDRDKPSEPERTKDGSQLTYLGQLRTQLTGLQDDINEFLTGRMELAKNKKKAGADEKRIQEEIN | 107 |
2 | -8.510 | PF15169.6; CQ062_XENTR/2-187; Domain of unknown function (DUF4564 topsan) | ali follow.. | 7 | 130 | ...................................................VTGISHPLTQSAVLGARSDVEAVAKELTKFLEFDLVGSRPQAVEESNDSESDEALD | 185 |
3 | -8.350 | PF15387.6; G5B2X8_HETGA/3-98; Domain of unknown function (DUF4611 topsan) | ali follow.. | 13 | 28 | ...............................................................LQKLLSGVAQMKELIPKFFEPLVQREAKGETLEGNDEDDAEDEN | 78 |
4 | -7.630 | PF09798.9; G0V572_NAUCC/83-732; DNA damage checkpoint protein | ali follow.. | 14 | 29 | .........................................................QSHVDELEKLKHELQTLEDE-KKFYLMGNRAKTITRTSTNQVAAEKTPGA | 77 |
5 | -6.650 | PF04657.13; Q7CQI5_SALTY/6-143; Putative inner membrane exporter, YdcZ | ali follow.. | 9 | 1 | ............................................................TLIFLIAAGVGLVVQNSIMVRITQTSSTILIAM.............. | 33 |
6 | -6.440 | PF07500.14; G3B2L5_CANTC/124-233; Transcription factor S-II (TFIIS), central domain | ali follow.. | 23 | 48 | .............................................................GYRNKLRTFVMNLRNKKNPELRDRMSPNEMAPETLKKEIEKLHKQN | 106 |
7 | -6.290 | PF11831.8; CDC5L_NEMVE/404-656; pre-mRNA splicing factor component | ali follow.. | 14 | 2 | PNMLLSTPYRTPGE-RQGMTPRGAIGTPSQRSVRDKLNINPEDAVMEEYESECAAKQQQSEA--EQLLAGLASLPAPSNDFLPETPAEASEEHKPMDFVEDAADID. | 114 |
8 | -6.170 | PF17119.5; F2SVE3_TRIRC/85-328; Mitochondrial protein up-regulated during meiosis | ali follow.. | 11 | 1 | .............................................AQYGEPHGDGDHKSPDERIVKLGKTLRTLSKQLPTILVNALPQE.................. | 44 |
9 | -6.170 | PF11799.8; B6QQ86_TALMQ/339-497; impB/mucB/samB family C-terminal domain | ali follow.. | 18 | 4 | ............................................ARAVPTQISIEDSYRGLEHFEDVRKQLQLLSTS----LIKRMRTDLIDEEVHKDTNQEDGTR. | 61 |
10 | -6.110 | PF12097.8; Q5NIP1_FRATT/1-374; Protein of unknown function (DUF3573 topsan) | ali follow.. | 13 | 21 | ......................................MGFSNSFKNSNEQSQKSNSIDKQG-ITQLQSQIANIQAEIN-HLTQ-IKNSNNSAQFATYSSKVENIGL | 86 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7. |