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Query: PF09167.11; L0IZ30_9MYCO/38-162; Domain of unknown function (DUF1942 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst PTVGKFGSQGTLVDAGGAVVQGWTVTNLRPSSDVIPFPVQGRLWEASATDTAIRGTVTPIIPDMNSRAANGDNYRVIWNVALEKGVNPSTLAQGGSTTGKLYFDVTATDPNSVVYNDGVQDLLIWLast
1 -66.200PF09167.11; L0IZ30_9MYCO/38-162; Domain of unknown function (DUF1942 topsan)  ali  100  1PTVGKFGSQGTLVDAGGAVVQGWTVTNLRPSSDVIPFPVQGRLWEASATDTAIRGTVTPIIPDMNSRAANGDNYRVIWNVALEKGVNPSTLAQGGSTTGKLYFDVTATDPNSVVYNDGVQDLLIW 125
2 -25.900PF11611.8; A4J6Q2_DESRM/57-186; Domain of unknown function (DUF4352 topsan)  ali follow..  1...FKVNQEAKVGN------LAYVASDIKTANPYLQKKTEEQFLLVKIKVTNNDKERTIDTNLFKLFDTQGKEYSADLYVNNDSHFFLEQVNPGMSRSGFIVFEIPKGMQ............... 111
3 -13.400PF16729.5; R6HDW6_9CLOT/35-157; Domain of unknown function (DUF5067 topsan)  ali follow..  28....................FKVSIENAEVTTSK----KGKKALLVTYAFNNGSDKTVRFADVLSAEYQNNTACLQAGMENQDYDIETTELKPGETKNVYEAYLLQDDSDVTVRVCK........ 123
4 -9.940PF14263.6; L0EUW8_LIBCB/1-121; Domain of unknown function (DUF4354 topsan)  ali follow..  10  25.....................EVIVYAKQKETGSIFSPHKFTYTDFDVTVVNFSQGIDLSKYCFKAML-GMKEFNVD---TIDEKLASKKLKNGERLRGVVVFSSNNSDVTQANI.......... 116
5 -9.200PF16430.5; C4ZDF6_AGARV/46-232; Domain of unknown function (DUF5027 topsan)  ali follow..  12  10.DIYNIGDEIQVKNNREYVAKSYIVNSVKIYDTKKDEVACGKLLLCDISVKNIEDECTVGDISLVYEINGACQLLGYPIYFSNAKDNEHGLVQGQSLDAQIGFCVDPAL................ 156
6 -8.840PF16781.5; H6NJD8_9BACL/56-244; Domain of unknown function (DUF5068 topsan)  ali follow..  19  48...............DEYQIVKVTGMNKRVASIPFQDQTDGYVVTAKVTIDNAAGKAMYYNNMYRIQLSKATDYIPNDGSAT----ETSKFAAGEKVTGLLSFTLTNEQFESL............ 155
7 -7.980PF07542.11; G4TD85_SERID/49-171; ATP12 chaperone protein  ali follow..  2....RFWNAAHVRQGDDYIEVTLDGRALKPGGNKLRVPASKKVLATLIANEWDVQDTILKAHALPLTSIASRAIDGLSTAEERLAVTENLLKYFD--TDTICYHEEEPEQLARLQEQHWNPILEW 121
8 -7.480PF18705.1; K6D628_BACAZ/213-354; Family of unknown function (DUF5643 topsan)  ali follow..  2.......QTKLISQSVKQEGIRLNIKKMVLT------PMSFILYYEQGASDDVQNRWHQVYVDLEVQDDLGNIYTG---------EVNGGSGTDSTMNWSKTFEKLNPNASKLIVTP........ 96
9 -7.070PF07705.11; Q8TPY5_METAC/349-453; CARDB  ali follow..  3.....................DLGIQDVKVSHNGLAKAWNKLNNTVSVTVINN-GPENADSFALELYSDGTPVESRQVTGLANGATETVDFSWKPEDIKDYTLKAVVVPGSIISDTDTTNNELS. 104
10 -6.670PF14524.6; Q888F1_PSESM/301-441; Wzt C-terminal domain  ali follow..  6................GDGAATLLFHMSASGREFPNSVESGEEIVLDLALQFNSTVVNPI-IGFTIKTKEGVTVYGTNSYMQDCEGTGLIGNAGNQAKARVKFRNA................... 95

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 1 8 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.