current user: public |
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Query: PF09837.9; Q7NI73_GLOVI/42-153; Uncharacterized protein conserved in bacteria (DUF2064 topsan), from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 | |||||||
# | Score | Template | Links and tools | %id | First | ILGEAARLTQWRRVIAYAGDPDWFAPWGGDFELLEQQGADLGERLLHAFEAVGTPAVGIGSDSPHLDSEIYRVAAERLEQVPVVIGPCTDGGYYLIALARPVDLFTAMPMGT | Last |
1 | -63.100 | PF09837.9; Q7NI73_GLOVI/42-153; Uncharacterized protein conserved in bacteria (DUF2064 topsan) | ali | 100 | 1 | ILGEAARLTQWRRVIAYAGDPDWFAPWGGDFELLEQQGADLGERLLHAFEAVGTPAVGIGSDSPHLDSEIYRVAAERLEQVPVVIGPCTDGGYYLIALARPVDLFTAMPMGT | 112 |
2 | -23.600 | PF01983.16; COFC_ARCFU/1-205; Guanylyl transferase CofC like | ali follow.. | 18 | 36 | VIDAAKPFGEIKVVCPSELD--------VEGVEVVVDTSDLNTTVNKVM--DEAPLAVIMSDLPLLSEEVLKRFFETEG--DVVVAPGRKGGTNMLLVRKRGFRVSYHFGSF | 135 |
3 | -7.330 | PF00710.20; Q5JIW4_THEKO/2-186; Asparaginase, N-terminal | ali follow.. | 15 | 52 | ............................DSTLIQPEDWVTIGRAVFEAFDEYDGIVITHGTDTLAYTSSALSFMIRNPPIPVVLTGPNSDAPRNLRT............... | 127 |
4 | -6.890 | PF13483.6; B9JRY8_AGRVS/77-244; Beta-lactamase superfamily domain | ali follow.. | 16 | 93 | ...................................GGDFEPNGNSIFIFEVAGLCIGHLG----HLHHELTDKQFAAIGRLDVVMVPV--DGGLTLGSDSMSRMVKRLR... | 160 |
5 | -6.360 | PF12804.7; Q5FTR9_GLUOX/6-165; MobA-like NTP transferase domain | ali follow.. | 12 | 66 | ...................................DVDGPAAGLLSAHRAYPDVAWLVLACDLPMLDRGTLDTLIAARDGEHVAV........................... | 115 |
6 | -6.320 | PF10356.9; Q6BJ13_DEBHA/52-255; Protein of unknown function (DUF2034 topsan) | ali follow.. | 11 | 1 | ......................................................STLFRGTLYELLAKQLMSSLLNCCSLTRI--GGSFDQGIDILGKWNLGHYWHALE... | 53 |
7 | -6.290 | PF13911.6; Q8YTT5_NOSS1/61-247; AhpC/TSA antioxidant enzyme | ali follow.. | 14 | 3 | ..........................................QREKEQIAARGIRICAIGIGDRNSGLKFCEYT--GFPQEWLFVDAKAE--HRILGLYR............ | 57 |
8 | -5.940 | PF14746.6; T1J3X6_STRMM/956-1123; WASH complex subunit 7, C-terminal | ali follow.. | 20 | 50 | ..............................................................VPPLTLSHIEHLIEKMSKKNKVGAAFTDDGFYILKLLDQYQEFDSLHW.. | 105 |
9 | -5.840 | PF09140.11; Q9A6C9_CAUVC/5-268; ATPase MipZ | ali follow.. | 21 | 72 | ...........................DNDVALAERPEEEQVAGFEAAFARAMAECDFILIDTPGGDSAITRMA---HGRADLVVTPMNDSFVDFDMLGTVDPVTLELT... | 150 |
10 | -5.720 | PF01638.17; YYBR_BACSU/22-112; HxlR-like helix-turn-helix | ali follow.. | 10 | 3 | .....................................GGKWKGILFYHMIDGKKRFNEFRRICPSITQRMLTLQLRELEADGIVVPPKVEYSLTEFGRTLEPIVLQMKEWGE | 84 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6. |